Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1097 ATGTCGCTGCCACCTTGCTCCCGGGAGCAACTGGCCCAGTTCTTGGGCCCAAACACAACAAACGCCGCCGCTGCAGCAGCCGCAATATGCGACCAATTCACCGCCGTAAGCCACAAGTTCACCGACACAGCCTTCGCCGTTGACAACACCTACCTTCTCTTCTCGGCGTACCTTGTGTTCTCTATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCGGTCCGCGCCAAGAACACTATGAACATCATGCTTACCAACGTCCTCGACGCCGCCGCCGGTGGGCTCTTCTACTACCTCTTCGGCTTCGCCTTCGCGTTCGGCGCACCCTCCAACGGCTTCATCGGCAAACACTTCTTCGGCCTCAAGGACGTTCCCACCGAAACCATCGACTACAGCTACTTCCTCTACCAGTGGGCGTTCGCCATAGCCGCCGCCGGCATCACAAGCGGCTCCATCGCCGAACGCACGCAGTTCGTGGCTTACCTCATCTACTCCTCCTTCCTCACCGGCTTCGTCTACCCCGTCGTGTCTCACTGGTTCTGGTCCGGCGATGGTTGGGCCTCCGCGACAAACACTGGCAACCTCCTCTTCTCCTCCGGCGTCATCGACTTCGCCGGCTCCGGCGTCGTCCACATGGTCGGCGGCGTGGCGGGTCTTTGGGGAGCCTTAATTGAAGGTCCTAGAATCGGAAGGTTCGACCATAATGGTCGAAGCGTTGCATTACGTGGCCACAGCGCTTCTTTAGTTGTGCTTGGAACCTTCATGCTTTGGTTCGGTTGGTACGGTTTTAACCCTGGCTCGTTCACCAAGATTCTCAGCGCTTATAGTTCTGGAAACTATTATGGTCAATGGAGCGCTGTGGGAAGAACCGCTGTCACAACAACTTTGGCTGGGTCAACGGCAGCTTTGACCACGCTCTTCGGGAAACGGGTTATATCCGGTCATTGGAATGTTACCGATGTGTGCAACGGTTTGTTAGGCGGTTTCGCTGCTATAACTGCCGGTTGTTCGGTTGTGGAGCCGTGGGCTGCAATCGTGTGCGGGTTCGTTGCTGCGCTGGTTTTGATTGCGTGTAATAAGTTGGCTGAGACGGTGCGTTATGATGATCCATTGGAGGCGGCGCAGTTGCACGGAGGGTGCGGCGCGTGGGGGGTGATATTCACGGCGCTGTTTGCGAAGGAGGAGTACGTGAACCAGGTTTACCCGGGTAAAGCGGGTCGACCCTATGGGTTGTTTATGGGTGGAGGAGGGAAGTTGTTGGCGGCGCACGTGATTCAGGTTTTGGTTATTACTGGGTGGGTTAGTGCAACGATGGGGCCCTTGTTTTGGGCTTTGCATAAGATGAAGTTGCTTCGGATCTCGGCGGAGGATGAACTTGCGGGTATGGATCTGACCCGACATGGTGGGTTTGCTTATGCTTATGAGGATGATGAGCACAAGCATGGGACTCAGTTGAGGAGGATTGAGCCTAACTCCTCTTCCACTCCCACCACAGATGGTTGA 1503 0.5635 MSLPPCSREQLAQFLGPNTTNAAAAAAAICDQFTAVSHKFTDTAFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGKHFFGLKDVPTETIDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASATNTGNLLFSSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHNGRSVALRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYSSGNYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRVISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAALVLIACNKLAETVRYDDPLEAAQLHGGCGAWGVIFTALFAKEEYVNQVYPGKAGRPYGLFMGGGGKLLAAHVIQVLVITGWVSATMGPLFWALHKMKLLRISAEDELAGMDLTRHGGFAYAYEDDEHKHGTQLRRIEPNSSSTPTTDG* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1097 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Apr8g1097 500 MobiDBLite consensus disorder prediction 481 500 - -
Apr8g1097 500 Gene3D Ammonium transporter AmtB like domains 23 492 IPR029020 -
Apr8g1097 500 PANTHER AMMONIUM TRANSPORTER 6 493 - -
Apr8g1097 500 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Apr8g1097 500 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 6 493 - -
Apr8g1097 500 SUPERFAMILY Ammonium transporter 47 453 - -
Apr8g1097 500 TIGRFAM amt: ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1097 Apr-Chr8 14967053 14969322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1097 6 497 Inorganic Solute Cotransporters AT4G13510 80.600 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1097 K03320 - egt:105950262 832.787