Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1089 ATGTTGCAAGATGTTATCCACCCTCCAACACCGCCTGAACAACTCTCCATTGATGAGATTTCAAGCCCGATCAGTGCTCGAATTTTCGAACTATGTGACTCTGAATTCTTCCCAGAGACACTGCCAAATTCTGAGGTTACCTCCAGCTCCAATTGTTGCCATGAAGAGATTTCCTCATATGCCACAAACCTATCTCCAACTTTAGATGTAGACAACAATAAGATCAATAGTAACAACAACAATATAGTCACCACCCCATCTAGTACTACAGCAACCAACACCAACAACAACAACGACACAACAAACAGTACTAACTTGTCTATTATCTTTGACTCCCAAGAAGAAATTGACAATGACATCTCAGCCTCCATAGACTTCTCATCATCTCCAGCTTTCGTGGTTCCCCCTCTTCTCCCAATCACAATTCAACAGGAACACTTTGATTTCTCTTCAGCTCAGCCACAATATCACACTGACCCTATTGTTGCACCCCTTGCTGGGGCTCCATTACCATCTGTTTTTGAAGATGATTGCATATCTTCCATCCCTTCTTATGTGCCTCTTAATCCTTCATCTCCTTCTTGCTCTTATCTAAGTCCTGGCATAGGAGTGTACATGCCTCAAGGGCCCCTTAACACTGCTTTATCTGCGGATGGTTCTGGTTTGTTTGGTGGCAACATTCTACTGGGGTCTGAACTGCAGACACAAGAATTGGACTACCAAGGAGAAAATGTTAGAATTTATTGTACAGATTCAATTCAGAGGGTGTTTAACCCACCAGACCTTCAGGCACTTGGTGGTGAGAGCCAGAAACTGGTATGTGGGGCTGGGAGTTCTGCCACTTTGGCACCAGAAATCTGTCACTTGGAGGACTCTACCTTAAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCATGCCGCAAAACTTTGGCAGATAGTAGACCCCGGGTTAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGAGCCATAGACAAGCTAGTAGCAATCATGAAGATGATGATGAAGAAATAATTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCCCATATAAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTTGATTTGA 1206 0.4229 MLQDVIHPPTPPEQLSIDEISSPISARIFELCDSEFFPETLPNSEVTSSSNCCHEEISSYATNLSPTLDVDNNKINSNNNNIVTTPSSTTATNTNNNNDTTNSTNLSIIFDSQEEIDNDISASIDFSSSPAFVVPPLLPITIQQEHFDFSSAQPQYHTDPIVAPLAGAPLPSVFEDDCISSIPSYVPLNPSSPSCSYLSPGIGVYMPQGPLNTALSADGSGLFGGNILLGSELQTQELDYQGENVRIYCTDSIQRVFNPPDLQALGGESQKLVCGAGSSATLAPEICHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGESHRQASSNHEDDDEEIIVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1089 401 MobiDBLite consensus disorder prediction 75 99 - -
Apr8g1089 401 PANTHER CCT MOTIF FAMILY PROTEIN 17 401 - -
Apr8g1089 401 MobiDBLite consensus disorder prediction 343 365 - -
Apr8g1089 401 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 401 - -
Apr8g1089 401 MobiDBLite consensus disorder prediction 343 364 - -
Apr8g1089 401 Pfam CCT motif 304 346 IPR010402 GO:0005515
Apr8g1089 401 ProSiteProfiles CCT domain profile. 304 346 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1089 Apr-Chr8 14510951 14514678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1089 304 360 C2C2-CO-like Transcription Factor Family AT5G57660 50.000 5.56e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr8g1089 CCT 5.2e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1089 - - gmx:100793417 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1089 8 14510951 14514678 Apr8g1089 8 14510951 14514678 ECH