Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1087 ATGGCAACGACCGAAGCAGTGGCGGAAGCGGTTACGGTGGCGCCGGGGTCAGTGCCGGAGACAGGTTTGAAGCACAAACTGGAGAGGAAATGGACGTTCTGGTTCGACAACCAATCCAAACCCAAACAAGGTGCTGCTTGGGGAACCTCACTTCGCAAGGTTTACACCTTCGAAACCGTCGAAGAGTTCTGGTGTCTGTATGATCAGATATTCAAGCCCAGCAAGTTGCAAAACAATGCGGACTTCCACTTGTTTAAAGCTGGAATTGAACCGAAATGGGAAGATCCTGAGTGTGCCAGTGGTGGAAAGTGGACTGTCACTAACAACAGCAGCAGGAAGGCTAACCTTGATAACATGTGGCTTGAAACTCTGATGGCTTTGATTGGGGAACAATTTGAGGATGCCGAGGACATATGTGGTGTGGTTGCAAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAGACAGCAGCAAATGAGGCTGCCCAGATGAGCATCGGAAGGAAGTGGAAGGAAATCATTGATGTTAACGACAAGATAACATATAACTTCCATGATGATTCTAGAACTAAAGGAGCAACAAAGGGTCGATACACAGTATAA 609 0.4778 MATTEAVAEAVTVAPGSVPETGLKHKLERKWTFWFDNQSKPKQGAAWGTSLRKVYTFETVEEFWCLYDQIFKPSKLQNNADFHLFKAGIEPKWEDPECASGGKWTVTNNSSRKANLDNMWLETLMALIGEQFEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDVNDKITYNFHDDSRTKGATKGRYTV* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1087 202 ProSitePatterns Eukaryotic initiation factor 4E signature. 81 104 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Apr8g1087 202 Pfam Eukaryotic initiation factor 4E 26 184 IPR001040 GO:0003723|GO:0003743|GO:0006413
Apr8g1087 202 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 3 193 IPR001040 GO:0003723|GO:0003743|GO:0006413
Apr8g1087 202 PANTHER BNAA05G12740D PROTEIN 3 193 - -
Apr8g1087 202 Gene3D RNA Cap, Translation Initiation Factor Eif4e 20 202 IPR023398 -
Apr8g1087 202 SUPERFAMILY eIF4e-like 14 195 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1087 Apr-Chr8 14458221 14464758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1087 25 202 Eukaryotic Initiation Factors Gene Family AT5G35620 68.333 1.45e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1087 K03259 - gmx:100499799 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1087 8 14458221 14464758 Apr8g1087 8 14458221 14464758 ECH