Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1066 ATGTGTGACCAAAACAATAAAAGGACATTGATTAACACAAGCCAAGAATATGCCAAGAAGAAGGGAAAGCATGGCAAGTTGAAGGAGAAGGAAATGGAAGGAGTCCGGTACCGAGGTGTTCGGCGGCGGCCATGGGGTAAGTTTGCGGCAGAGATTAGAGACCCGTCTAGGCAAGGGTCACGGTTGTGGTTAGGGACCTTTGATACGGCTGAAGCAGCAGCTAGAGCTTATGATCAAGCAGCCTTTAGATTGAGGGGTCATGTTGCAATTTTGAATTTTCCTAATGAGTACCATTCTCAAGTTAGGGACTACCCTCCAAATTTAGCACCATCATCATCATCATCATCATCCATTACTCATGGACAAAAGAGGCAAGTTTTTGAGTTTGAGTATTTGGATGACAAAGTGTTGGAGGAGCTTCTTGAGTCAGAAGAGGGGAAGGCACAAAAATATTGA 456 0.4452 MCDQNNKRTLINTSQEYAKKKGKHGKLKEKEMEGVRYRGVRRRPWGKFAAEIRDPSRQGSRLWLGTFDTAEAAARAYDQAAFRLRGHVAILNFPNEYHSQVRDYPPNLAPSSSSSSSITHGQKRQVFEFEYLDDKVLEELLESEEGKAQKY* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1066 151 Gene3D AP2/ERF domain 35 96 IPR036955 GO:0003700|GO:0006355
Apr8g1066 151 MobiDBLite consensus disorder prediction 17 31 - -
Apr8g1066 151 MobiDBLite consensus disorder prediction 1 31 - -
Apr8g1066 151 Pfam AP2 domain 36 87 IPR001471 GO:0003700|GO:0006355
Apr8g1066 151 SUPERFAMILY DNA-binding domain 36 95 IPR016177 GO:0003677
Apr8g1066 151 MobiDBLite consensus disorder prediction 1 16 - -
Apr8g1066 151 ProSiteProfiles AP2/ERF domain profile. 36 94 IPR001471 GO:0003700|GO:0006355
Apr8g1066 151 PANTHER DNA-BINDING DOMAIN 23 145 IPR044808 GO:0003700|GO:0009873
Apr8g1066 151 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Apr8g1066 151 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Apr8g1066 151 CDD AP2 44 95 IPR001471 GO:0003700|GO:0006355
Apr8g1066 151 PANTHER ETHYLENE RESPONSE FACTOR 23 145 - -
Apr8g1066 151 SMART rav1_2 36 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1066 Apr-Chr8 14000779 14001234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1066 35 147 AP2-EREBP Transcription Factor Family AT3G23230 67.769 9.28e-52 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr8g1066 AP2 3.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1066 - - gmx:100814296 185.267