Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1063 ATGGAACGTGGGATTCTTGATGGTATCATCAATAGGCTGCTTCAAGTGAGAGGGAGACCAGGGAAACAGGTGCAGCTTTCAGAGGCAGAAATTAGGCAACTTTGTATGGTGTCTAGAGACGTCTTCTTGAAGCAGCCCAATTTGTTGGAACTTGAGGCTCCAATTAAGATATGTGGAGACATCCATGGTCAATATTCCGATCTTCTAAGACTTTTTGAGCATGGTGGATTTCCTCCTCGCTCCAACTACCTATTCTTGGGAGATTATGTGGACCGTGGCAAGCAAAGTCTTGAGACAATATGTCTTCTTTTGGCTTACAAGATAAAATACCCTGAAAACTTTTTCCTTCTTAGAGGCAACCACGAATGCGCATCGATAAATCGTGTCTATGGATTTTATGATGAGTGTAAAAGGAGATTCAATGTGAGGATATGGAAAATATTTGCAGATTGCTTCAACTGCATGCCAGTGGCAGCTATCATTGATGAAAAGATATTTTGTATGCATGGTGGACTCTCTCCTGAATTGCACAAACTAAGTCAGATTAGTAGTTTGCCGCGGCCAACGGAAGTTCCTGAAAGTGGTCTACTATGTGATCTTTTGTGGTCTGATCCTTGTAGAGACATTGATGGTTGGGGTGAGAGTGAGCGTGGAGTTTCATATACATTTGGTGCTAGCAGGGTGACTGAGTTTCTTGAAAAGCATGATCTTGACTTGATTTGCAGAGCACACCAGGTTGTTGAAGATGGATATGAATTTTTTGCTAATAGGCAACTTGTGACTATCTTTTCTGCTCCTAACTACTGTGGAGAATTTGACAATGCTGGAGCAATGATGACAGTTGATGAGACTCTTATGTGCTCTTTTCAAATATTAAGGCCTGAGGATCGTAGAAAGCCTAAGTCTGGTTTTGGCAGCAAAGCTACATTCAAGGCAATTTTCGATGCTGCTAGAGTATGA 960 0.4177 MERGILDGIINRLLQVRGRPGKQVQLSEAEIRQLCMVSRDVFLKQPNLLELEAPIKICGDIHGQYSDLLRLFEHGGFPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRVYGFYDECKRRFNVRIWKIFADCFNCMPVAAIIDEKIFCMHGGLSPELHKLSQISSLPRPTEVPESGLLCDLLWSDPCRDIDGWGESERGVSYTFGASRVTEFLEKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMTVDETLMCSFQILRPEDRRKPKSGFGSKATFKAIFDAARV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1063 319 CDD MPP_PP1_PPKL 6 294 - -
Apr8g1063 319 Gene3D - 2 303 IPR029052 -
Apr8g1063 319 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Apr8g1063 319 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Apr8g1063 319 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Apr8g1063 319 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Apr8g1063 319 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Apr8g1063 319 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Apr8g1063 319 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Apr8g1063 319 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Apr8g1063 319 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Apr8g1063 319 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 317 - -
Apr8g1063 319 SMART pp2a_7 26 296 IPR006186 GO:0016787
Apr8g1063 319 SUPERFAMILY Metallo-dependent phosphatases 18 297 IPR029052 -
Apr8g1063 319 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Apr8g1063 319 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1063 Apr-Chr8 13856480 13863505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1063 33 242 Calmodulin-binding Proteins AT5G63870 29.600 8.10e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1063 K06269 - gmx:100780047 619.002