Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1047 ATGATGGATCATGTAATTGGTGGAAAGTTCAAGCTTGGGAGGAAGATTGGGAGTGGATCTTTTGGCGAGCTTTATTTGGGTGTTAATTTGCAAAGTGGAGAGGAAGTGGCTGTTAAGCTTGAATCTGTGAAGACCAAGCATCCTCAACTTCTCTATGAATCCAAATTGTATATGCTTCTTCAAGGAGGAACTGGAATACCCCATTTAAAATGGTCTGGAGTTGAAGGTGACTACAATGCCATGGTTATTGATCTTCTTGGACCAAGTCTTGAAGATTTATTTAATTTTTGCAATAGAAAATTCTCTCTGAAGACAGTTTTGATGCTTGCAGATCAGCTAATAAACAGAGTTGAGTATATGCACTCCCGAGGTTTTCTGCATCGTGATATAAAGCCTGACAATTTTTTAATGGGTTTAGGTCGCAAGGCAAACCAGGTATACATCATTGATTATGGCCTTGCAAAAAAGTATCGTGATCTTCAAACACATAAGCATATACCGTACAGGGAAAACAAGAATCTCACAGGAACTGCACGATATGCTAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTGCTAATGTACTTTTTGCGAGGAAGCCTCCCTTGGCAAGGCTTGAGAGCTGGTACTAAAAAGCAGAAATATGAGAAGATAAGTGAAAAGAAAATGCTAACTCCAATAGAGGTTTTATGCAAGTCATATCCATCAGAGTTCACATCTTACTTCCACTATTGCCGATCATTACGGTTTGAGGATAAACCTGATTATTCATATCTTAAGAGACTCTTTCGGGACCTATTCATTCGAGAAGGTTGTCAGTATGACTATGTATTTGATTGGACTGCATTGAAATACTCATTAATTGGATCCAATTCTAGGGCTCGACCAAGTGATAAACCAGCCTTAAACCCAAGACCATCAGGAGAGAGATTACAACGGCCTTCAGTTGGACAAGAGATTCGAGAGAGATTATCAGGTGCAGTGGAGGCATTTCAAAGAAAGAATGGCTCTGGGCATGGTCTGCATAATGATCATTCCAGGCATAGATCTTCAGATGATGTGCCATCTTCCAAAGATGTGCAACCTGATTCTGATAGGGCTCGCAGTTCTTCCCGCAATGGCAGTGCCTCAAAAAGGCCTGTCACATCAAGCAGCAGACCAAGCGCATCTGGTGAACCCAGTGAAAGCCGTTCCAGTAGATTGGTCTCAAGCAGTGGTCGTCTATCTACCACTCAGAGGATTCAACCAGGTTTTGAGTCCAAATCTCCATTTACCCGTGCTGCAGGGACAAGAGGAGGTCGTGATGATGCACTCAGGAGTTTTGAGCTCCTGTCAATTGGTACAGGAAAAAGGAAATGA 1392 0.4188 MMDHVIGGKFKLGRKIGSGSFGELYLGVNLQSGEEVAVKLESVKTKHPQLLYESKLYMLLQGGTGIPHLKWSGVEGDYNAMVIDLLGPSLEDLFNFCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGTKKQKYEKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGCQYDYVFDWTALKYSLIGSNSRARPSDKPALNPRPSGERLQRPSVGQEIRERLSGAVEAFQRKNGSGHGLHNDHSRHRSSDDVPSSKDVQPDSDRARSSSRNGSASKRPVTSSSRPSASGEPSESRSSRLVSSSGRLSTTQRIQPGFESKSPFTRAAGTRGGRDDALRSFELLSIGTGKRK* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1047 463 PANTHER CASEIN KINASE-RELATED 2 450 - -
Apr8g1047 463 Pfam Protein kinase domain 11 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1047 463 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
Apr8g1047 463 MobiDBLite consensus disorder prediction 301 328 - -
Apr8g1047 463 Gene3D Transferase(Phosphotransferase) domain 1 1 331 - -
Apr8g1047 463 PANTHER CASEIN KINASE I-LIKE PROTEIN 2 450 - -
Apr8g1047 463 MobiDBLite consensus disorder prediction 378 430 - -
Apr8g1047 463 MobiDBLite consensus disorder prediction 345 448 - -
Apr8g1047 463 ProSiteProfiles Protein kinase domain profile. 10 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1047 463 MobiDBLite consensus disorder prediction 349 377 - -
Apr8g1047 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Apr8g1047 463 SMART serkin_6 10 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1047 463 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Apr8g1047 463 CDD STKc_CK1_delta_epsilon 9 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1047 Apr-Chr8 13524112 13534025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1047 9 214 MAP Kinase Kinase Kinase AT3G06030 26.389 7.63e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Apr8g1047 Pkinase 5.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1047 K08960 - jre:108991207 805.438