Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1035 ATGCCTTTCAAGAGGTACGTTGAGATTGGAAGGGTTGCTCAGATCAACTATGGGAAAGAGTATGGGAGGCTCGTGGTCATTGTCGATGTCATTGACCAGAACAGAGCTCTTGTTGATGCCCCTGATATGGTGAGATCGCAAATGAATTTCAAGAGGCTCTCACTCACTGACATTAAGATTGATATTAAGAGGATCCCCAAGAAGAAGGATCTCATTCAAGCGATGGAGGCTGCTGATGTTAAGAACAAGTGGGAGAAAAGTTCATGGGGTAGAAAATTGATTGTGCAGAAGAGGAGGGCATCCCTCAATGATTTTGATAGGTTCAAGATAATGTTGGCAAAGATCAAGAGGGCAGCTATTGTTAGGCAAGAGCTTGCTAAGTTGAAGAAGAGTGCATCTTAG 402 0.4353 MPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRIPKKKDLIQAMEAADVKNKWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAAIVRQELAKLKKSAS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1035 133 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Apr8g1035 133 Gene3D - 92 127 - -
Apr8g1035 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 132 IPR039660 GO:0003723|GO:0003735
Apr8g1035 133 Gene3D - 1 84 IPR014722 -
Apr8g1035 133 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 132 - -
Apr8g1035 133 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Apr8g1035 133 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1035 Apr-Chr8 13270418 13274123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1035 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 82.707 2.16e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1035 K02875 - gmx:100817659 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1035 8 13270418 13274123 Apr8g1035 8 13270418 13274123 ECH