Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1034 ATGGGAATAAGAGATTTTCATATCAAGTTTAAGGCATTCCGGTTGAAACGCTTTTTCTTTGGCAGAAAGAGAAATCAATGGAGTGCAAACAAGCCTTCATGGATGATTCCAATAACACACGGACATCATGTGGTGGAGCAACATGTGATTAAAGGTGGTTCTGATGACTCGGACTTTGATTCAGTTGTCATACAGAGAGAGCAAATGGACCACACAGAGTTGTGGTATTTTGGAATCTTTGATGCTCTAATTGGAGATGGGGTCACCAAGTATATGCAATCCCATTTCTTTGGCAAGAAGCTAAAAGAGTGTCATATGAGGAGGAAAACCAAAGAAACACTCAAGAAAGCTTACCTAGGTGTAAGAACAAAGATCAGAGAGGCACATAGATCAGAAGAGGAAACATGCAGAATAGGTTCAACATCTGTGATGGTCATAAATGGAGAAAAACTTGTGATAGCCAACATGGGAGATTACAGAACTGTCTTGTGCAGAGATGGTGTTGCTTATCAGACAAATGGAAGACACAATCAATCAGCAAAGAGACATTGGTATCGCAGACTCTTTTCAGGGAGTACAACTAGTACAAAGCATTCTAAATTCTCAGAACTTGTGGTGGGAGCTGATAGGATCGACTCTGATACTGAATTTTTGATCTTAGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTTATAAGGCACATAGAAGATCCACAAGAAGCAGCTGAGTGCCTGGCAAAAGAAGCTCTGATTAGGATGAGCAAAAGCAACATTTCATGCTTAGTAATTCGCTTTGATTGA 819 0.4054 MGIRDFHIKFKAFRLKRFFFGRKRNQWSANKPSWMIPITHGHHVVEQHVIKGGSDDSDFDSVVIQREQMDHTELWYFGIFDALIGDGVTKYMQSHFFGKKLKECHMRRKTKETLKKAYLGVRTKIREAHRSEEETCRIGSTSVMVINGEKLVIANMGDYRTVLCRDGVAYQTNGRHNQSAKRHWYRRLFSGSTTSTKHSKFSELVVGADRIDSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALIRMSKSNISCLVIRFD* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1034 272 ProSiteProfiles PPM-type phosphatase domain profile. 56 271 IPR001932 -
Apr8g1034 272 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 271 - -
Apr8g1034 272 CDD PP2Cc 60 271 IPR001932 -
Apr8g1034 272 SMART PP2C_4 46 269 IPR001932 -
Apr8g1034 272 Pfam Protein phosphatase 2C 75 177 IPR001932 -
Apr8g1034 272 Pfam Protein phosphatase 2C 210 264 IPR001932 -
Apr8g1034 272 SUPERFAMILY PP2C-like 60 272 IPR036457 -
Apr8g1034 272 PANTHER ALPHABET, ISOFORM E-RELATED 6 271 - -
Apr8g1034 272 Gene3D - 47 272 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1034 Apr-Chr8 13253798 13256724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1034 1 271 PP2C-type Phosphatase Gene Family AT3G23360 46.043 7.53e-80 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1034 K19704 - gmx:100794054 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1034 8 13253798 13256724 Apr8g1034 8 13253798 13256724 ECH