Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1014 ATGGCACCTTTGAAGATCCAACCAATTGCGATCGACATCGAATCAGAGAGAGTGAAGGAAGCGGTGGTGGTTCGGAACGAGTCGGTGCTAAAATCACGCTTGAGAAGATTGTTCGTGTTCGATCGGCAGTTACAGAGGAACAACAAGGATGGAGAGTTCGAGCCGAGCTCGGTTTGCTTGGCCAAAATGGTGCAGAATTTCATGGAGGAGCAACCACAGCCTCCGAAATGCGGTCGCAACCGCTGCAACTGCTTCAACGCCAACAGCTCCGACGAGGACGATTGCGACCTCTTCGGAGCTCAACCTTCCGCCGGAAACGGAACCGAATCATCGTCCATCACCGACGCTACCGAAACGCTGAAGAGCTTGATTCTTTGCGCGAGCGTCGGCGAGAGGAACCTGTTAGCTGACGTGGCGAGGATCGTTGAGAAAAACGGCAAGTCGTACAAGCGAAAAGATGATTTTAGAAAGGTCGTAGCCGATGGCCTTTCGTCCCTCGGCTACGATTCCTCCGTTTGCAAATCCAAATGGGATAAAACCTCTTCTTGCCCTGCCGGGGAATATGAATTCATCGATGTGATTGTGGAAGAGGAAAGGTTGATCGTTGATGTGGATTTTCGATCGGAGTTTGAGATTGCGAGATCGACGGGGACGTACAAGGCGATACTTCAATCGCTGCCGTTCATCTTCGTCGGAAGATCGGAGAGGTTAGGGCAAATCGTATCGATCGTGTCGGAGGCGGCGAAGCAGAGTTTGAAGAAAAAAGGGATGCACGTTCCGCCATGGAGGAAGCGCGATTACATGCTCGCTAAGTGGCTCTCTCCCTCTGCTGTTAGGGCAAAGCAACCCCCGTCCTCCTCCGTCCATGTCGCCGCCGTGCCGGAAACAAAGTCCTCCAATGGGGACGCGGCGTTGACGGAGGGCGGTTGTGGTGAGTTGGAACTGATTTTCGGCGAGAAAACGTCGCCGCAGGAGCTGGAGGGTTATTTCGTTGGAGAGAAGGCAGAGTCAGCGGTGATGGCCCCGGCATGGCAACCCCCGGCGGTGAAGCCGAAGAGCATTGAAAGAGGAGCTAAGGTGGTGACCGGATTGGCCTCTCTCCTCAAGGACAAGGCCTAG 1119 0.5416 MAPLKIQPIAIDIESERVKEAVVVRNESVLKSRLRRLFVFDRQLQRNNKDGEFEPSSVCLAKMVQNFMEEQPQPPKCGRNRCNCFNANSSDEDDCDLFGAQPSAGNGTESSSITDATETLKSLILCASVGERNLLADVARIVEKNGKSYKRKDDFRKVVADGLSSLGYDSSVCKSKWDKTSSCPAGEYEFIDVIVEEERLIVDVDFRSEFEIARSTGTYKAILQSLPFIFVGRSERLGQIVSIVSEAAKQSLKKKGMHVPPWRKRDYMLAKWLSPSAVRAKQPPSSSVHVAAVPETKSSNGDAALTEGGCGELELIFGEKTSPQELEGYFVGEKAESAVMAPAWQPPAVKPKSIERGAKVVTGLASLLKDKA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1014 372 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 28 369 - -
Apr8g1014 372 PANTHER OS03G0796600 PROTEIN 28 369 IPR006502 -
Apr8g1014 372 Pfam PDDEXK-like family of unknown function 62 275 IPR006502 -
Apr8g1014 372 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 156 276 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1014 Apr-Chr8 12626828 12629172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1014 - - vra:106772733 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2674 8 36481151 36487818 Apr8g1014 8 12626828 12629172 ECH
Apr8g1014 8 12626828 12629172 Apr8g1014 8 12626828 12629172 ECH