Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1010 ATGGAACCTCGCCAACCGCCGTCACCCCCGCCACGCACCATCCTCGGGAAGTACCAACTCACGCGCTTCTTAGGGCGCGGAAACTTCGCGAAGGTGTACCAGGCTCGTTCCCTGGTCGACGGTGCCACCGTGGCCGTTAAGGTCATCGACAAATCCAAAACTGTGGACGCAGCCATGGAGCCCCGCATCGTGCGCGAAATCGATGCCATGCGCCGCCTCCACCACCACCCTAATATCCTCAAAATCCACGAGGTCATGGCCACCAAAACCAAGATCTACCTCATCGTCGACTACGCAGGCGGCGGCGAGCTCTTCTCCAAGCTCTCCCGCCGTGGAAGGTTGGCGGAATCCCTGGCGCGGCGCTACTTCCAACAACTCGTCTCAGCGCTATGCTTCTGCCATCGCAACGGCGTGGCACACCGCGACCTCAAGCCGCAGAACCTCCTCCTCGACGCCGATGGCAACCTCAAGGTCTCCGACTTCGGCCTCTCGGCACTGCCGGAGCAGCTCAAGAACGGCCTCCTCCACACCGCGTGCGGCACGCCGGCGTACACAGCACCGGAGATCCTTCGCCGCTGCGGCTACGATGGTTCTAAGGCCGACGCGTGGTCCTGCGGCGTCATCCTCTACGTGCTCCTAGCCGGTCACCTTCCGTTCGACGACTCGAACATTCCGGCGATGTGCAAGAGGATTTCCCGGCGGGAATACCAGTTTCCGGCGTGGATCTCGAAAGCGGCGCGAACCCTAATTTACCAATTACTTGACCCGAACCCTAATAGGCGAATGAGATTGGAGAGTGTGGTGGAAAACGCGTGGTTTAAGAAATCGCTGAGGGAGAAGGCAGAAGAGAGCGTTTTGGAGAGTGATTTGTATAATAAGTGTTGTGACGGTTATAAATTGGGAATGAACGCGTTTGATATAATATCGATGTCGTCGGGGTTGGATTTGAGAGGGTTGTTCGAAACGACGTCAGACAAGGGGAGGAGGAGGGAGAAGAGGTTTACTTCCGATAAGAAGGTGGATGTGGTTGAGGCTAAGGTCAAAGAGGTTGGCTTGAGTTTGGGGTTTAGGGTTGAGGTTGGAAAGAATGGTGTGATTGGGTTGGGGAAAGGGAAGGTGGCTCTTGTTGTTGAGGTGTTTGAGATTGTGTCTCACTTGTTGTTGGTGGCTGTTAAAGTCGTTGATGGTGGGTTGGAGTTTGAGGAGCTTCACTGGGATCATTGGAAACTTGGCCTTCAAGATCTTGTTCTCTCTTGGCATAATAATAATGAATCATCAATCCTGTGA 1287 0.5501 MEPRQPPSPPPRTILGKYQLTRFLGRGNFAKVYQARSLVDGATVAVKVIDKSKTVDAAMEPRIVREIDAMRRLHHHPNILKIHEVMATKTKIYLIVDYAGGGELFSKLSRRGRLAESLARRYFQQLVSALCFCHRNGVAHRDLKPQNLLLDADGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILRRCGYDGSKADAWSCGVILYVLLAGHLPFDDSNIPAMCKRISRREYQFPAWISKAARTLIYQLLDPNPNRRMRLESVVENAWFKKSLREKAEESVLESDLYNKCCDGYKLGMNAFDIISMSSGLDLRGLFETTSDKGRRREKRFTSDKKVDVVEAKVKEVGLSLGFRVEVGKNGVIGLGKGKVALVVEVFEIVSHLLLVAVKVVDGGLEFEELHWDHWKLGLQDLVLSWHNNNESSIL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1010 428 SUPERFAMILY Protein kinase-like (PK-like) 14 281 IPR011009 -
Apr8g1010 428 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Apr8g1010 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Apr8g1010 428 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Apr8g1010 428 ProSiteProfiles Protein kinase domain profile. 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1010 428 Pfam NAF domain 302 359 IPR004041 GO:0007165
Apr8g1010 428 CDD CIPK_C 303 413 - -
Apr8g1010 428 Gene3D Kinase associated domain 1, KA1 304 417 - -
Apr8g1010 428 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1010 428 SMART serkin_6 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g1010 428 PANTHER SERINE/THREONINE KINASE 11 422 - -
Apr8g1010 428 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 422 - -
Apr8g1010 428 Gene3D Transferase(Phosphotransferase) domain 1 11 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1010 Apr-Chr8 12519018 12520651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1010 1 421 CBL-interacting serine-threonine protein kinases AT4G14580 60.000 9.79e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Apr8g1010 Pkinase 4.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1010 K12761 - gmx:100305372 705.671