Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0997 ATGGATCGGTTTTTTCCTGAGAAACTTCTGGGTGAGATTTTCTGGGATGAATCTCTCTTAGCCACAAACCAAAGTGATTTTCTCCAGAATTCCCAGTTCGTGAAGGATCAACCTTTTCTTCGTTCAACTCAAAGTGCTTTCGTTCAATATCGAGAACTACCCATAATCAATTCTCCAAAATGGTCAAATTCTCAAACCATGAGTAAGAGAATGATTGCGTTCTTGAGAAAAAGTTTGACCGCAGAGAGCAACACGGGAGCAGAGCATGAAAGAGAACGTTGTTTTAGGCACATGATTAACGAAAGAATGAGGAGACAGAGGCAGAGACAGTGTTGCTTGGCCCTGCATGCGTTGTTACCTCATGGAACCAAAACGGATAATAATTCTGTAATTCAAATGGCAGCCAAGGAGATCATTCGGCTACAAGGATGCAGAGAAGAGTTGCAGAGGAAAAATGTTGTTCTTGAAGCAAATCTTGAAGACGTGAAGAGCAACAGAGTTGAGGGAAGCAAAGTTCAATTTTTAAGAGTTCCATATCCTACTTCGGGGATAGATTCTATGATTGAGACCCTCAAATGCTTGAAATACCGTGGAGTGGACACCAGAAGCATCAAATCAACTTTTTCCCCGCATGAGTTGTTTGCAGCGTTAGAGACAGAGACCAAGGTTGCAGATGCTGAAGTGGAAAGGGCAATTTGGAGCACACTTGATGAACTTGAGTGGAGCTTTCTTTCCCATGCCATTGAAGGTTCTAAAAGGCAAAGGCTAGATCTGAAGCTTTAG 783 0.424 MDRFFPEKLLGEIFWDESLLATNQSDFLQNSQFVKDQPFLRSTQSAFVQYRELPIINSPKWSNSQTMSKRMIAFLRKSLTAESNTGAEHERERCFRHMINERMRRQRQRQCCLALHALLPHGTKTDNNSVIQMAAKEIIRLQGCREELQRKNVVLEANLEDVKSNRVEGSKVQFLRVPYPTSGIDSMIETLKCLKYRGVDTRSIKSTFSPHELFAALETETKVADAEVERAIWSTLDELEWSFLSHAIEGSKRQRLDLKL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0997 260 PANTHER TRANSCRIPTION FACTOR BHLH92 1 247 - -
Apr8g0997 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 92 141 IPR011598 GO:0046983
Apr8g0997 260 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 247 IPR044658 -
Apr8g0997 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 152 IPR036638 GO:0046983
Apr8g0997 260 SMART finulus 98 147 IPR011598 GO:0046983
Apr8g0997 260 Coils Coil 145 165 - -
Apr8g0997 260 Pfam Helix-loop-helix DNA-binding domain 96 142 IPR011598 GO:0046983
Apr8g0997 260 Gene3D - 82 158 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0997 40 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 39.459 1.04e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0997 - - gmx:100815874 333.954