Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0996 ATGGCCGCTTCGCTGGTGTTTACAGTGAGAAGGCGTGAGGCGGAGCTGGTGGCTCCAGCGAAACCCACCCCACGCGAAGTGAAGCTACTATCAGACATAGATGACCAAGATGGCCTGCGTTTCCAAATTCCGGTGATACAGTTCTATCGCTATGATCCATCAAAAGCAGGGAAAGACCCTGTTGAGGTGATCAGAAAGGCTCTTGCAGAAACACTTGTGTTTTACTATCCTTTTGCAGGTCGACTTAGGGAAGGACCTGGTCGGAAACTCATGGTTGACTGTACTGGAGAAGGTGTTATGTTCATTGAGGCTGATGCAGATGTCACGCTTAAGCAATTTGGTGATGCTCTTCAACCTCCCTTTCCATGCTTGGAGGAGCTTCTTTTCGATGTTCCTGGTTCTGGAGATGTCCTTAACTCTCCCTTGCTTCTTATACAGGTAACACGACTGAAATGTGGGGGCTTCATCATGGCTCTCCGGCTAAACCACACGATGTGCGATGCAGCTGGTTTAGTCCAATTCATGACTGCGTTGGGTGAAATGGCTCGTGGAATGCACGAACCATCAACCCCACCGGTGTGGAACAGAGAGCTTCTAAATGCGAGAGACCCACCAAAAGTGACATGCAGCCACCGTGAATACGAGCAAGTGGCTGACACAAAGGGAACCATCATCCCCTTAGACGACATGGCCCATCGCTCTTTCTTCTTTGGTCCCACTGAGTTAGCTGCCATTCGTAGCCTCATTCCTCCCAACCAACAAAAATGCTCTAATTTTGAAATCCTCACTGCATGTCTCTGGCGTTGTCGCACAATAGCACTGCAGCCAGAGAAAGACGAGGAGGTTCGCATACTCTGCATTGTTAACGCGCGTTCCAAATTTAACCCTCCTTTACCAACAGGTTACTATGGCAACGCTTTTGCATTTCCCGTTGCGGTTACCACTGCTGGGAAGCTATGTGAAAGTCCGTTGGGATATGCTCTGGAGTTAGTAAGGAAAGCAAAAGCAGATGTGACCGAGGAATACATGCATTCACTGGCAGATTTAATGGTCATCAAGGGAAGGCCTCACTTTACTGTGGTGAGGTCTTATCTTGTGTCAGATGTAACGCGTGCTGGGTTTGGAGGGGTTGACTGCGGGTGGGGAAACCCTGCTTATGGAGGACCAGCTAAGGGAGGAGTTGGAGCCATACCTGGTGTCGCAAGCTTTTACATCCCCTTCAAAAATGCTGAAGGAGAGGAAGGTTTAGTGATTCCAGTTTGTTTACCATCTGATGCCATGGAGAGGTTTGTCAAAGAGTTGGATGGCATGCTTAAGAACCATATCCAACCTGTTAGGGGTGGTCCAAACTCAGGTTTTATCATTTCTTCATTATAG 1377 0.4851 MAASLVFTVRRREAELVAPAKPTPREVKLLSDIDDQDGLRFQIPVIQFYRYDPSKAGKDPVEVIRKALAETLVFYYPFAGRLREGPGRKLMVDCTGEGVMFIEADADVTLKQFGDALQPPFPCLEELLFDVPGSGDVLNSPLLLIQVTRLKCGGFIMALRLNHTMCDAAGLVQFMTALGEMARGMHEPSTPPVWNRELLNARDPPKVTCSHREYEQVADTKGTIIPLDDMAHRSFFFGPTELAAIRSLIPPNQQKCSNFEILTACLWRCRTIALQPEKDEEVRILCIVNARSKFNPPLPTGYYGNAFAFPVAVTTAGKLCESPLGYALELVRKAKADVTEEYMHSLADLMVIKGRPHFTVVRSYLVSDVTRAGFGGVDCGWGNPAYGGPAKGGVGAIPGVASFYIPFKNAEGEEGLVIPVCLPSDAMERFVKELDGMLKNHIQPVRGGPNSGFIISSL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0996 458 Gene3D - 215 433 IPR023213 -
Apr8g0996 458 Gene3D - 4 214 IPR023213 -
Apr8g0996 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
Apr8g0996 458 Pfam Transferase family 9 434 - -
Apr8g0996 458 PANTHER - 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0996 Apr-Chr8 12270548 12272956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0996 9 434 Monolignol Biosynthesis Gene Families AT5G48930 29.955 9.13e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0996 K19861 - gmx:100797017 805.438