Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0995 ATGGAAACAGCGCTCACTTGCTTCTTCTGTAGTCGAATCCCAGCGAAAGCGAAATTGGGGGCTGCAAGTGAGCACTTCCGTTGCAATGCCTCTGGACACGTGTCCTTTTCTTCCATTGGCTCATTCTGCGGTAACATTGCGTATACCATGTCCATGTGCTCTTTGTCCCCTTCGTTTGTAACCCACAGGCACAGGCTCAGGCTCATTCGAAGTGAAACTAAGCTTCGCAGTAACACCAAAAGTAGAAGTGGTAGAAGAAGAAGTGGTTTTAATAAAAGTGGGTCTTCTCAGTCTGAGGCAGTGAGCAATCCCAGTGAGAACAGCGTGGAAGGGGGTAGTGGTATCCATCAGAATGGAGACCCTATTGGGAAGAGGGAACTGGGTAAGAGTGTGATGAGGTGGATTCGTGATAGCATGAGGGCTATGGCATCTGATTTTGCTTCAGCAGAGTTACAGGGAGAGTTGGAGTTCTCAGAGCTGAAGCAGCGCATGGGGCCAGGTCTCACTTTTATCATCCAGGCTCAGCCATATCTGAATGCGGTTCCTATGCCCCTTGGTCTTGAAGTTATCTGCTTCAAGGCCTGCACCCACTATCCCACTCTCTTCGACCATTTCCAGAGGGAGCTTCGTGATGTTCTTCAAGACCTGCAGACTAAGTCCTTGATTCAGGACTGGCGACACACTGAGTCTTGGAAACTGTTTAAGGAGCTCGCCAATTCAGCTCAGCATAGGGCGGTTGCGAGAAAAATAACGCAGCCCAAGGCTGTTCATGGCGTTTTGGGAATGGATGTAGAAAAGGTGAAAGCAATGCAGCACAGGATTGATGAATTTACCAACCGCATGTCAGAACTACTTCGTATTGAAAGGGATGCTGAATTGGAGTTTACTCAGGAGGAGTTGGATGCTGTTCCTAAACCTGATGATGCTTCTGATTCTTCAAAACCGATTGATTTCTTGGTTAGCCATAGCCAGTCTCAGCAAGAACTCTGTGACACCATTTGTAATTTAAATGCCATCAGTACCTCTACAGGTCTGGGTGGAATGCATTTGGTGTTGTTCAAGGTCGAAGGGAACCACCGGTTACCACCTACCACACTTTCACCTGGAGACATGGTTTGTGTGAGAACATGTGACAGCAAGGGTGCAATTACAACTTCTTGCATGCAAGGATTTGTGAACAGTCTTGGGGATGATGGCTATAGTATTACAGTTGCTTTAGAGTCACGCCATGGTGATCCTACATTCTCTAAACTATTTGGGAAGAGTGTGCGCATTGACCGTATTCAAGGACTGGCTGATACACTAACGTATGAGCGCAATTGTGAAGCCCTGATGCTGCTTCGGAAGAATGGTTTACGAAAGAAGAATCCTTCAATTTCTGTTGTTGCTACACTGTTTGGAGATGGGGAAGATGTTGCGTGGCTTGAGAAGAATTATTTGGCCGAATGGGCTGAAGAAAATTTGGACGGAATATTAGGAAGTGAAACTGTAGATGATTCTCAGCGTAGAGCAATTGCACTAGGTTTGAATAAAAAGAGGCCTGTATTGGTTATCCAAGGGCCTCCTGGTACAGGTAAGACTGGTTTGCTCAAGCAACTTATAGCATGTGCTGTTCAGCAAGGTGAAAGGATTCTGGTTACAGCACCAACTAATGCAGCTGTTGATAACATGGTTGAAAAGCTTTCAAGTGTCGGATTAAATATCGTGCGGGTTGGAAATCCAGCTCGTATATCAAAGACAGTGGGATCAAAGTCTTTGGGAAAAATTGTAAATGCTAAGCTTGCAAGCTTTCGAGAAGAATATGAGAGGAAGAAGTCAGATCTAAGGAAAGATCTAAGACATTGTTTAAGGGATGATTCACTGGCTGCGGGTATACGCCAACTTCTTAAACAGCTGAGTAGGTCACTGAAGAAAAAGGAAAAGCATACCATTAATGAAGTCCTCTCTAGTGCTCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGACCCTTTGATTCGAAGGCTAGATACTTTTGACTTGGTTGTCATAGATGAAGCCGGACAGGCAATTGAACCCGCATGCTGGATTCCTATATTGCAGGGAAAGCGCTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTAGAAGGTGGTCTTGGAATATCTCTACTGGAGAGAGCTACAACTTTGCATGAAGGGATTCTCACCACCAGGTTAACAACACAGTACCGTATGAATGATGCAATTGCTAGTTGGGCTTCAAAGGAGATGTATGGTGGATTATTGAAGTCCTCTGAGACTGTCTTTTCTCATCTTCTTGTAGATTCTCCTTTTGTTAAGCGTACTTGGATAACGCAGTGCCCACTGCTATTGCTTGATACTAGAATGCCATATGGAAGTCTGTCGGTTGGTTGCGAAGAGCATCTAGACCCAGCTGGAACAGGTGTTAGCCCAACTGCTATTGCAGTGCAATCCCCTTATGTTGCTCAAGTACAACTTTTGAGGGACAAGCTTGATGAGTTTCCAGAAGCTGCAGGTACTGAGGTTGCAACCATTGATAGTTTTCAAGGTCGAGAAGCTGATGCTGTAATTTTATCCATGGTACGATCAAACACGATGGGAGCTGTTGGATTCCTTGGGGATAGCAGAAGAATCAATGTTGCCATCACGAGAGCACGCAAACATTTAGCTGTGGTCTGTGACAGCTCAACTATATGCCACAATACCTTCTTAGCAAGACTTCTGCGTCATATAAGACATTTCGGTAGGGTGAAGCATGCAGAACCAGGTAGTTTTGGAGGGTATGGACTCGGGATGAATCCCATTTTACCTTCCATTAATTAG 2850 0.4523 METALTCFFCSRIPAKAKLGAASEHFRCNASGHVSFSSIGSFCGNIAYTMSMCSLSPSFVTHRHRLRLIRSETKLRSNTKSRSGRRRSGFNKSGSSQSEAVSNPSENSVEGGSGIHQNGDPIGKRELGKSVMRWIRDSMRAMASDFASAELQGELEFSELKQRMGPGLTFIIQAQPYLNAVPMPLGLEVICFKACTHYPTLFDHFQRELRDVLQDLQTKSLIQDWRHTESWKLFKELANSAQHRAVARKITQPKAVHGVLGMDVEKVKAMQHRIDEFTNRMSELLRIERDAELEFTQEELDAVPKPDDASDSSKPIDFLVSHSQSQQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRTCDSKGAITTSCMQGFVNSLGDDGYSITVALESRHGDPTFSKLFGKSVRIDRIQGLADTLTYERNCEALMLLRKNGLRKKNPSISVVATLFGDGEDVAWLEKNYLAEWAEENLDGILGSETVDDSQRRAIALGLNKKRPVLVIQGPPGTGKTGLLKQLIACAVQQGERILVTAPTNAAVDNMVEKLSSVGLNIVRVGNPARISKTVGSKSLGKIVNAKLASFREEYERKKSDLRKDLRHCLRDDSLAAGIRQLLKQLSRSLKKKEKHTINEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPACWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERATTLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSETVFSHLLVDSPFVKRTWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGVSPTAIAVQSPYVAQVQLLRDKLDEFPEAAGTEVATIDSFQGREADAVILSMVRSNTMGAVGFLGDSRRINVAITRARKHLAVVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGYGLGMNPILPSIN* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0995 949 CDD DEXXQc_SMUBP2 498 746 - -
Apr8g0995 949 Gene3D - 745 931 IPR027417 -
Apr8g0995 949 MobiDBLite consensus disorder prediction 88 114 - -
Apr8g0995 949 SMART ultradead3 493 745 IPR014001 -
Apr8g0995 949 Gene3D - 280 729 IPR027417 -
Apr8g0995 949 MobiDBLite consensus disorder prediction 71 124 - -
Apr8g0995 949 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 62 949 - -
Apr8g0995 949 Pfam AAA domain 497 713 IPR041677 GO:0004386
Apr8g0995 949 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 62 949 - -
Apr8g0995 949 Coils Coil 598 618 - -
Apr8g0995 949 Coils Coil 267 294 - -
Apr8g0995 949 Pfam AAA domain 723 904 IPR041679 -
Apr8g0995 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 496 912 IPR027417 -
Apr8g0995 949 SMART AAA_5 512 727 IPR003593 -
Apr8g0995 949 Gene3D - 300 431 - -
Apr8g0995 949 CDD SF1_C_Upf1 747 921 IPR041679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0995 Apr-Chr8 12238226 12250511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0995 491 687 Core DNA Replication Machinery Family AT1G08840 26.633 1.30e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0995 - - gmx:100799347 1548.1