Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0989 ATGGGCTTAGAAATTTTGGAGCCTAACAGTTGCATTAGGGGTTGCTGCAACAGCGCCTCTATTCCTCTCCATCTCCCTCCCTCCTCTTATACTCTCCTCTCACCTATTGCCCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGCGTGAGGGTTGCTGTGAAGAAACCCGTCTTGTCAACTTCAGAAGACATTCATAAGTTTCATAAAGAATTGCAATTACTTTGCAAACTAGATCACCCTGGAATAGCAACACTTATTGCCGCCCATGCAAAACCACCCAATTACATGTTTTTCTTCAAGTTGTATGAGTCTCTGAATCTCGCACAGAAGTTGCACGTGGAAGAATGGACCCCGACTCTCAATGATGCACTTATGATAACCATGCAGTTAGATTTTGGTTTGGCAGAACACAAGAATGATCTTAAGGGAGTATCTATAGAGAATTGGAAGTCTTCTGGAAAGCCTACCGGTGGTTTTCACAAAAAGAACATGGTTGGAACACTCATTTACATGGCACCTGAAATATTACGAAAAGAGTTACATACAGAAAAGTCAGATGTCTACAGCTTTGGTGTATCAATCAATGAAATCCTTACTGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGTTCAGGCTCACACAGTGCTTGAGATGAACTATACTGAACAGCAACTCACAGCAGCTATTGTTTCTGATGGATTACGGCCAGTCCTTGCTACTGAGGAGTTTGGTATACCATCCAGATTATTGTCAGTGATACAGAAATGTTGGGATGCAAATCCTAAAAATAGACCTTCCTTTGATGACATTGTCAAGGAACTAGAATTTATTATGGAGCACATGACGTTAAAAAAGGCAGAAGATATGTGTATCAGATCTTCTAATTTGCATGTTGTTGCTGAACCTGTGGACATGACCGATCACCTCCAGGCTTATCAAGAGAGTTTTAGCTGGTCCACTCAAGGAGAACTTTTGGCCAGGAGTGCCTCTAGTGCAACTGATACTGGTTTGAAAACTTGGCATGAGTCTTATGATGAGCAATTGGCATACCGTCCAATACTTTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGATACACATTTCATTCTGCCCCATATTTGCGATGAAAAGGATGTGTATGCTTTTGGGATATTTGATGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCTGTTTTACAGACTTCAGGTTTTATGGGCAGTCCTGCTAATGCACTAGTGGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCCTATCGCAATGCCAACAGATGTATCCAGAAGAATTGGCATCCTGGATGTACAGCAATTGCTGCTCTTATAGTAAGGAACAAGCTATTTGTTGCTAACATTGGTGATTGCAGGGCAATCTTATGTCGTGCTGGTAATCCAATTGCTCTAAGTAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTTATTCGTCAGGGTGGCCATGTGCATTGGCAAGTTGATACTTGGAGAGTTGGTCTTCCTGCGCTTCAGGTTACTCGTTCCATTGGTGATGATGATCTAAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAGAGTTCCTTATGTGCAGAGGATGAATTTCTGGTCATGGCCAGTGATGGCCTCTGGGATGTCATAAGCAGTATGGAGGTCATAAATACAATAAAAGATACGGTTAAAGAGCCTGGAATGTGCTCTAAGAGATTGGCTACTGAAGCAGTGGAACGTGGGAGCAAAGATAACATCACAGTTATTGTTGTATTTTTACGCCCGGTATCTACAGCAGAGAGAATTTATTAG 1881 0.4296 MGLEILEPNSCIRGCCNSASIPLHLPPSSYTLLSPIARGAESVVYEGTLDGVRVAVKKPVLSTSEDIHKFHKELQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESLNLAQKLHVEEWTPTLNDALMITMQLDFGLAEHKNDLKGVSIENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVSINEILTGVVPYTDLRAEVQAHTVLEMNYTEQQLTAAIVSDGLRPVLATEEFGIPSRLLSVIQKCWDANPKNRPSFDDIVKELEFIMEHMTLKKAEDMCIRSSNLHVVAEPVDMTDHLQAYQESFSWSTQGELLARSASSATDTGLKTWHESYDEQLAYRPILSWGSYATCGRRETMEDTHFILPHICDEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTSGFMGSPANALVEAFIRTDAAFRKELDSYRNANRCIQKNWHPGCTAIAALIVRNKLFVANIGDCRAILCRAGNPIALSKDHVASCLQERERVIRQGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITESSLCAEDEFLVMASDGLWDVISSMEVINTIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0989 626 Pfam Protein phosphatase 2C 364 609 IPR001932 -
Apr8g0989 626 Gene3D Transferase(Phosphotransferase) domain 1 135 309 - -
Apr8g0989 626 PANTHER - 1 133 - -
Apr8g0989 626 PANTHER - 134 626 - -
Apr8g0989 626 SMART PP2C_4 349 614 IPR001932 -
Apr8g0989 626 ProSiteProfiles Protein kinase domain profile. 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0989 626 SUPERFAMILY PP2C-like 347 618 IPR036457 -
Apr8g0989 626 CDD PP2Cc 361 616 IPR001932 -
Apr8g0989 626 Pfam Protein kinase domain 134 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0989 626 ProSiteProfiles PPM-type phosphatase domain profile. 359 616 IPR001932 -
Apr8g0989 626 SMART PP2C_SIG_2 374 616 IPR001932 -
Apr8g0989 626 Gene3D Transferase(Phosphotransferase) domain 1 18 134 - -
Apr8g0989 626 SUPERFAMILY Protein kinase-like (PK-like) 23 302 IPR011009 -
Apr8g0989 626 Gene3D - 350 621 IPR036457 -
Apr8g0989 626 PANTHER PROTEIN PHOSPHATASE 2C 134 626 IPR015655 GO:0004722|GO:0006470
Apr8g0989 626 PANTHER PROTEIN PHOSPHATASE 2C 1 133 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0989 Apr-Chr8 12080891 12094820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0989 99 626 PP2C-type Phosphatase Gene Family AT2G40860 60.071 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Apr8g0989 PP2C 1.8e-61 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0989 - - gmx:100785390 1098.19