Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0987 ATGGGTCCTGACCCTCTTTGCCGGCAATGGGAAAGCCCCGAGATGAACAACAAACCCTGCCTTCAACAGTCACCGCCGAGGATCAACGGCGGGATGCGGCGGCGGCAGGATGCGGTGGCTGCTGCGCCTCTGCCGTTGGACTCAGATGCGTCCTTGTCTTGCTTTTCTCAGTCGCGCTGTTCCTCTCCGCACTCTTCTGGTTACCCCCATTCGTTCACTTCGCAGATCAAAAGAATCTGCATTTCAATTCTAAGTACAAAGTGTAATCCGAATACTACCGAGGTGGCTCACCTGAATGGATGTGGTCATGATATTGTTGCAAGCTTTTATGTTAAGATGCCAGTTTCTTTTCTAGAGGATAACATCTTGCGGCTTTCTGATGACATTTTTGAAGAGATAGGGGTTTTCTCTACCAAAGTGGTCATTTTGTCCCTAGATCCTTTACCAGGGTCAAACATGACAAAAGTGGTGTTTGCAGTTGATCCTGATGGTAAATATTCAGAAATGTCTTCAGCTGCCATTAGTTTGATAAGAGCATCATTTACAGAACTGGTTATACGCCAATCATATCTCCAGCTCACTCCATCATTGTTTGGTGTTCCCTCCTTTTTTGAGGTGCTAAAATTTAAAGGAGGGATCACTATCATTCCCCAACAGACTGTGTTTCCTCTGCAGACAGTCCAAACATTATTCAACTTTACTTTGAATTTCTCTATTTATGAAATACAATCAAATTTTGATGAGCTGACAAGTCAGCTAAAGTCTGGACTACATTTGGCACCCTATGAGAACTTGTATGTCATCTTATCAAATTCTGAAGGTTCTACAGTAGTCGCTCCTACTATTGTTCAATCATCTGTCCTACTTGCAGTTGGGATTACACCATCAAATGGGAGGCTAAAGCAACTGGCACAAACGATCATGGGACATCATTCATGGAACCTCGGATTGAATAACACTGAATTTGGTAGGGTTAAGCAAGTTCGACTTTCCTCCATCTTGCAACACTCCCTCCATGGCAGTGGTGGTAGACGTAGTGGCTCTACCTGGTCACCTTCCCCTGCCCCTCTGCCTCATCGTCACCATCACCATCACCACCACCATCATCATCAGCACCAAAGCCACCGCCACAATGCCCAAGTATTTCCTGATATTCCACCTACACCCGAACCTGCACCTAGGACCGGGGAAGGTGCTACTTCACCTATGTTTGGTTCTTCTGCCCCTGCAAGAACTGTGCCTGCCCCAGGGAGAACTTATGCTCAGCCTCCTAGTTGTTGGTTTGGGTATAGGAAGAGGTTTACACGGAATACTCTGAAACATGTCCATCTAACACCTTCAGTTGCCCCTACTAATGCTCCACATTATCCTGTTACCTTTCCACGGGTTGGGACCCCATCACATGCCTCTTATTCAGTTCCTGCTTTGAGTCCTTTACCAAATGTAGCTTTTGCTAGTACTGAGCCCCCTCCTAATGCATATTTTCATGGGCCATCACCTTCTTCATCTTCTGCAGGTTATGCTAGGACTGTCAAATGGACATCTTTAATGTTTTTAGTACTTGTATTACTTATATAA 1578 0.4544 MGPDPLCRQWESPEMNNKPCLQQSPPRINGGMRRRQDAVAAAPLPLDSDASLSCFSQSRCSSPHSSGYPHSFTSQIKRICISILSTKCNPNTTEVAHLNGCGHDIVASFYVKMPVSFLEDNILRLSDDIFEEIGVFSTKVVILSLDPLPGSNMTKVVFAVDPDGKYSEMSSAAISLIRASFTELVIRQSYLQLTPSLFGVPSFFEVLKFKGGITIIPQQTVFPLQTVQTLFNFTLNFSIYEIQSNFDELTSQLKSGLHLAPYENLYVILSNSEGSTVVAPTIVQSSVLLAVGITPSNGRLKQLAQTIMGHHSWNLGLNNTEFGRVKQVRLSSILQHSLHGSGGRRSGSTWSPSPAPLPHRHHHHHHHHHHQHQSHRHNAQVFPDIPPTPEPAPRTGEGATSPMFGSSAPARTVPAPGRTYAQPPSCWFGYRKRFTRNTLKHVHLTPSVAPTNAPHYPVTFPRVGTPSHASYSVPALSPLPNVAFASTEPPPNAYFHGPSPSSSSAGYARTVKWTSLMFLVLVLLI* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0987 525 MobiDBLite consensus disorder prediction 336 353 - -
Apr8g0987 525 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 102 522 - -
Apr8g0987 525 MobiDBLite consensus disorder prediction 357 376 - -
Apr8g0987 525 MobiDBLite consensus disorder prediction 1 36 - -
Apr8g0987 525 PANTHER F20B24.21 102 522 - -
Apr8g0987 525 MobiDBLite consensus disorder prediction 336 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0987 Apr-Chr8 12013606 12019561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0987 102 524 C3H Transcription Factor Family AT3G10810 45.602 1.97e-84 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0987 - - aprc:113871213 989.949