Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g0975 | ATGGCGCAGAGTAATTGGGAAGCAGATAAAATGCTTGATGTTTATATTTATGATTATTTGGTGAAGAAAAAGTTGCATAATACTGCTAAGGCATTCATGTCAGAAGGAAAGGTTTCTCCGGATCCAGTAGCAATTGATGCTCCTGGCGGTTTTCTTTTTGAGTGGTGGTCTGTTTTCTGGGATATATTTATTGCAAGGACAAATGAGAAACATTCTGAGACAGCTGCAGCATATTTAGAGGCTCAACAGATTAAAGCAAAGGAACAACAACAACTACAAATGCAGCAGTTTCAATTAATGCGCCAAGCTCAGCTGCAAAGAAGAGATTCTAACCATCCTCCCATTGGAGGTCCTGCAAATGCTATCACTACAGAAGGAATGCTTGGGCAATCTACTGCCAGTGCTTTGGCTGCAAAAATGTATGAGGAGCGAATGAAGCACTCTAACCCCATGGATACGGAGACATCCCAACCACTTTTAGATGCTAGAATGGCCCTCTTGAAATCAACAAATCATCCTGGTCAGATGGTTCAAGGAAATTCAGGAAGTGTGACAGCGGCTTTGCAGCAAATCCAGGCTAGAACTCAGCAAACCCCTGATATCAAAGGTGATGTCAACATGGGTACCATCCAGAGATCCTTGCCTATGGATCCTTCAATTTATGGGCAGGGAGGAATGCAGTCAAAGCCTGGAATTACAAATGCAGGATTAAATCCAGGAGTTGGTGGTCTCACATTGAAAGGATGGCCTTTAACTGGCATAGATCAAATTCGTCCCGGGTTTGGTGCACAAGTTCAAAAGCCTCTCCTCCAAAGTTCAAATCAGTTTCAGCTTTTACCACAACAACAACAACAGCAGATCCTTGCACAGGTACAGGCACAAGGAAATATTGGCAATTCACCAGTTTATGGAGATATGGATCCGCAGAGATTAAGGGGATTAGCTAGGGGAAGTTTGAATGCCAAAGATGGTCAATCCATTGCAAATGATGGATCAATAGGCTCTCCAATGCAATCTACTTCATCTAAGATCAACATGCCACAGGTCCAACAGTCTACCTCCCAGCAACAACAGGATCCTTTGCATCCACAGCAACTGAATAACCGGAAAAGGAAAGGGCCTACTTCTTCAGGAGCTGCCAACAGTACTGGAACAGGAAATACACTAGGCCCTTCTAATTCTCAACCATCAACTCCATCTACTCATACTCCTGGTGATGGAGTTGCTATGCCGGGTAACTTGCAGAATGTTGCTGGTGTATCCAAAGGTTTAATCATGTATGGTGCTGATGGAGCAGGTGGTCTTGCATCCTCCACAAATCAGCTGGACGACATGGAGCATTTTGCAGATGTTGGCTCCTTAGATGATAATGTGGAATCATTTCTCTCACAAGATGACGGTGATGGAAGGGACTTGTTTGGCACATTGAAACGGGAGCATGCTACTGATGCTTCAAAAGGCTTTTCCTTTAATGAAGTTGGTTCCATTCGCAAAAGCAACAGTAAAGTTGTTTGCTGTCATTTCTCTTCAGATGGGAAAATATTAGCTAGTGCTGGACATGACAAGAAGGTTGTTCTGTGGAACATGGAGACGCTGCAAACAGAAAGCACTCCAGAGGAGCACAATCTTATTATTACTGACGTTCGCTTCAGACCAAATTCAACTCAGCTGGCAACATCTTCATTTGATACTACTGTGCGGCTGTGGGATGCTGCAGATCCAAGCTTTTCTTTACAGACATATAGTGGTCATACTTCACATGTGGTGTCCCTTGATTTCCATCCAAAGAAAAACGACCTATTCTGTTCTTGTGATGATAACAATGAGATTCGCTTATGGAATATCGGTCAATATTCTTGCACTCGTGCTTTTAAGGGAGGATCTACACAGGTGAGGTTTCAACCAAGGAGTGGCCACCTACTGGCGGCAGCAAGTGGCAGTGTTGTGTCTCTCTTTGATGTTGAGACAGAGAGGCAGATGCACACATTACAGGGACACTCTGCAGATGTGCACTGTGTATGTTGGGATGTAAATGGAGAATACTTGGCATCTGTGAGTCAAGAATCTGTCAAAGTGTGGTCACTTAACTCTGGGGATTGCATTCACGAACTTAGTGCCAGTGGACACATGTTTCATTCTTGTGTTTTTCACCCAAGCTACTCCACTACCCTCTTGGTTATTGGTGGATACCAGTCATTGGAGCTATGGAACCTGGCCGAGAATAGATCCATGTCAATTTCAGCTCATGAATGTGTGATATCTGCCTTAGCACAATCACCAGTGACAGGAATGGTTGCTTCTGCCAGTCATGACAAATCTGTAAAGATTTGGAAATAA | 2337 | 0.4373 | MAQSNWEADKMLDVYIYDYLVKKKLHNTAKAFMSEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSETAAAYLEAQQIKAKEQQQLQMQQFQLMRQAQLQRRDSNHPPIGGPANAITTEGMLGQSTASALAAKMYEERMKHSNPMDTETSQPLLDARMALLKSTNHPGQMVQGNSGSVTAALQQIQARTQQTPDIKGDVNMGTIQRSLPMDPSIYGQGGMQSKPGITNAGLNPGVGGLTLKGWPLTGIDQIRPGFGAQVQKPLLQSSNQFQLLPQQQQQQILAQVQAQGNIGNSPVYGDMDPQRLRGLARGSLNAKDGQSIANDGSIGSPMQSTSSKINMPQVQQSTSQQQQDPLHPQQLNNRKRKGPTSSGAANSTGTGNTLGPSNSQPSTPSTHTPGDGVAMPGNLQNVAGVSKGLIMYGADGAGGLASSTNQLDDMEHFADVGSLDDNVESFLSQDDGDGRDLFGTLKREHATDASKGFSFNEVGSIRKSNSKVVCCHFSSDGKILASAGHDKKVVLWNMETLQTESTPEEHNLIITDVRFRPNSTQLATSSFDTTVRLWDAADPSFSLQTYSGHTSHVVSLDFHPKKNDLFCSCDDNNEIRLWNIGQYSCTRAFKGGSTQVRFQPRSGHLLAAASGSVVSLFDVETERQMHTLQGHSADVHCVCWDVNGEYLASVSQESVKVWSLNSGDCIHELSASGHMFHSCVFHPSYSTTLLVIGGYQSLELWNLAENRSMSISAHECVISALAQSPVTGMVASASHDKSVKIWK* | 779 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 496 | 531 | - | - | |
Apr8g0975 | 778 | Pfam | WD domain, G-beta repeat | 501 | 528 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | Pfam | WD domain, G-beta repeat | 537 | 570 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | Pfam | WD domain, G-beta repeat | 658 | 694 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | Pfam | WD domain, G-beta repeat | 578 | 614 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | Pfam | WD domain, G-beta repeat | 745 | 778 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 746 | 778 | - | - | |
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 538 | 570 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | SMART | Lish | 8 | 40 | IPR006594 | GO:0005515 | |
Apr8g0975 | 778 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 515 | 529 | IPR019775 | - | |
Apr8g0975 | 778 | Gene3D | - | 630 | 778 | IPR015943 | GO:0005515 | |
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 581 | 615 | - | - | |
Apr8g0975 | 778 | PANTHER | TRANSCRIPTIONAL COREPRESSOR LEUNIG_HOMOLOG | 1 | 778 | - | - | |
Apr8g0975 | 778 | SMART | WD40_4 | 574 | 614 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | SMART | WD40_4 | 656 | 694 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | SMART | WD40_4 | 739 | 778 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | SMART | WD40_4 | 531 | 570 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | SMART | WD40_4 | 697 | 737 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | SMART | WD40_4 | 617 | 653 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | SMART | WD40_4 | 489 | 528 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 746 | 778 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | ProSiteProfiles | LIS1 homology (LisH) motif profile. | 8 | 40 | IPR006594 | GO:0005515 | |
Apr8g0975 | 778 | CDD | WD40 | 492 | 778 | - | - | |
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 538 | 570 | - | - | |
Apr8g0975 | 778 | PRINTS | G protein beta WD-40 repeat signature | 515 | 529 | IPR020472 | - | |
Apr8g0975 | 778 | PRINTS | G protein beta WD-40 repeat signature | 557 | 571 | IPR020472 | - | |
Apr8g0975 | 778 | PRINTS | G protein beta WD-40 repeat signature | 765 | 778 | IPR020472 | - | |
Apr8g0975 | 778 | Gene3D | - | 473 | 629 | IPR015943 | GO:0005515 | |
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 663 | 703 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | PANTHER | TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 | 1 | 778 | IPR044716 | GO:0003714 | |
Apr8g0975 | 778 | MobiDBLite | consensus disorder prediction | 319 | 414 | - | - | |
Apr8g0975 | 778 | MobiDBLite | consensus disorder prediction | 322 | 404 | - | - | |
Apr8g0975 | 778 | Pfam | LisH | 10 | 36 | IPR006594 | GO:0005515 | |
Apr8g0975 | 778 | SUPERFAMILY | WD40 repeat-like | 490 | 778 | IPR036322 | GO:0005515 | |
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 496 | 537 | IPR001680 | GO:0005515 | |
Apr8g0975 | 778 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 581 | 623 | IPR001680 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g0975 | Apr-Chr8 | 11760778 | 11775663 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g0975 | 575 | 777 | Miscellaneous Gene Families | AT5G08390 | 26.316 | 4.90e-16 | 80.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | LUG | Apr8g0975 | WD40 | 0.0099 | CL0186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g0975 | - | - | gmx:100797756 | 1356.66 |