LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr8g0971	ATGACTCGCCTCAGGCGACTCAGCACTGCTGTCGGAGCTGTTTTAGCCACCGCATATGGTGGAACCATCCTTCTCTCTCCTCCGGTCTCCGCCAGTGACCACGGAGGAGGATCGCACCTCGCCGCTGTCCGCCAGAAGATCCACGATCCCTTCGCGGTCTTACCCTCTAGAGAGGTCCAGCAGTCGTCGCTGATCGGTGCTAGCTCGGCGAATCCTCTCGACATTCTGGTCATCGGCGGTGGCGCCACCGGCTCCGGTGTGGCTCTCGACGCTGTCTCGCGCGGCCTCCGCGTTGGTCTAGTAGAAAGAGAGGATTTCTCTTCCGGAACTTCCTCACGCTCCACCAAGCTCATACATGGAGGTGTCCGATACTTGGAGAAAGCTGTCTTTAAACTTGACTATGGCCAGCTGAAGTTAGTATTCCATGCACTTGAGGAGCGTAAACAGGTTATTGACAATGCACCACACCTATGTCATGCTTTGCCTTGTATGACTCCATGTTTTGACTGGCTTGAAGTAGTGTACTACTGGCTTGGCTTGAAAATGTATGATTTAGTCGCAGGAGCACGGCTCTTGCATTTATCAAGATATTATTCTGCAAAAGAGTCTGTTGAGCTCTTTCCCACTCTGGCAAGGGAGGGAAAAGGTAGAAGCCTGAGGGGCACAGTTGTTTATTATGATGGGCAGATGAATGATGCACGGCTTAATGTTGGGTTGGCTTGCACGGCGGCATTAGCTGGTGCAGCAGTGCTGAACCATGCTGAAGTTGTGTCCCTACTGAAGGATGATACTGGTGAACGGATAACTGGTGCGCGAATTAGGGACAATTTAACTGGCAAAGAGTTTGATACATATGCAAAAGTAATTGTGAATGCAGCTGGGCCATTTTGTGATTCTGTAAGGAAAATGGCTGACAAAAATGCACGAGATATGATTTCTCCAAGCAGTGGTGTACATATAATACTGCCCGATTATTATTCTCCAGAGGGAATGGGCTTAATTGTTCCTAAAACTAAGGATGGGCGTGTCGTTTTCATGCTACCATGGTTGGGACGAACAGTTGCTGGAACTACAGATTCCAACACTACCATTACTTTTCTTCCAGAACCGCATGAAGATGAAATACAATTTATATTGGATGCCATATCTGATTACCTCAATGTTAAAGTTCGACGCACTGACGTTCTTTCGGCCTGGAGTGGCATTCGCCCATTAGCAATGGACCCATCAGCTAAAAATACGGAGAGTATCTCCAGGGATCATGTTGTCTTTGAGGATCACCCTGGTTTGGTCACCATCACTGGTGGCAAGTGGACTACCTACCGGAGCATGGCAGAAGATGCTGTCAATACAGCTATAAAGTCTGGGAAATTGAACCCCACGAATGGATGTATCACCAACAAACTCAGGATTGTTGGTGGTGAAGAGTGGGATCCTGCATCTTTTACAGTTCTTACTCAACAGTATGTACGCATGAAGGTAACATATAAGGGTAAAGTTGTTCCTGGGATAATGGACAGTTCTACAGCAAAGCACTTGTCTCATGCATATGGAACATTGGCTCAACGTGTGGCTGCCATTGCTCAGAATGAAAATTTGGGTAAGCGACTAGCCCATGGTTACCCATTTTTGGAGGCTGAGGTGGCCTACTGTGCTCGTCATGAATATTGCGAATCTGCCATTGACTTCATTGCAAGGAGGTCTCGCCTTGCATTTCTTGACACTGATGCAGCCGGACGGGCATTACCTCGAGTGATTCAAATATTAGCAGCTGAGCACAAATGGGACAGGTCAAGGCAAAAGGCAGAGTTGCAGAAGGCGAAAGAGTTTTTGGAGACTTTTAAATCCTCCAAAAATGCTCAGTTCTATGATGGCAAACACAATTAG	1887	0.4759	MTRLRRLSTAVGAVLATAYGGTILLSPPVSASDHGGGSHLAAVRQKIHDPFAVLPSREVQQSSLIGASSANPLDILVIGGGATGSGVALDAVSRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFKLDYGQLKLVFHALEERKQVIDNAPHLCHALPCMTPCFDWLEVVYYWLGLKMYDLVAGARLLHLSRYYSAKESVELFPTLAREGKGRSLRGTVVYYDGQMNDARLNVGLACTAALAGAAVLNHAEVVSLLKDDTGERITGARIRDNLTGKEFDTYAKVIVNAAGPFCDSVRKMADKNARDMISPSSGVHIILPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSNTTITFLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVFEDHPGLVTITGGKWTTYRSMAEDAVNTAIKSGKLNPTNGCITNKLRIVGGEEWDPASFTVLTQQYVRMKVTYKGKVVPGIMDSSTAKHLSHAYGTLAQRVAAIAQNENLGKRLAHGYPFLEAEVAYCARHEYCESAIDFIARRSRLAFLDTDAAGRALPRVIQILAAEHKWDRSRQKAELQKAKEFLETFKSSKNAQFYDGKHN*	629

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr8g0971	628	ProSitePatterns	FAD-dependent glycerol-3-phosphate dehydrogenase signature 2.	435	445	-	-
	Apr8g0971	628	SUPERFAMILY	FAD/NAD(P)-binding domain	73	338	IPR036188	-
	Apr8g0971	628	Pfam	FAD dependent oxidoreductase	74	442	IPR006076	GO:0016491
	Apr8g0971	628	Gene3D	-	162	406	-	-
	Apr8g0971	628	PRINTS	FAD-dependent glycerol-3-phosphate dehydrogenase family signature	73	85	IPR000447	GO:0004368\|GO:0006072\|GO:0009331
	Apr8g0971	628	PRINTS	FAD-dependent glycerol-3-phosphate dehydrogenase family signature	86	96	IPR000447	GO:0004368\|GO:0006072\|GO:0009331
	Apr8g0971	628	PRINTS	FAD-dependent glycerol-3-phosphate dehydrogenase family signature	102	114	IPR000447	GO:0004368\|GO:0006072\|GO:0009331
	Apr8g0971	628	PRINTS	FAD-dependent glycerol-3-phosphate dehydrogenase family signature	154	166	IPR000447	GO:0004368\|GO:0006072\|GO:0009331
	Apr8g0971	628	PRINTS	FAD-dependent glycerol-3-phosphate dehydrogenase family signature	399	405	IPR000447	GO:0004368\|GO:0006072\|GO:0009331
	Apr8g0971	628	PRINTS	FAD-dependent glycerol-3-phosphate dehydrogenase family signature	430	442	IPR000447	GO:0004368\|GO:0006072\|GO:0009331
	Apr8g0971	628	Gene3D	-	72	443	IPR036188	-
	Apr8g0971	628	PANTHER	GLYCEROL-3-PHOSPHATE DEHYDROGENASE	1	627	IPR000447	GO:0004368\|GO:0006072\|GO:0009331
	Apr8g0971	628	ProSitePatterns	FAD-dependent glycerol-3-phosphate dehydrogenase signature 1.	78	95	IPR000447	GO:0004368\|GO:0006072\|GO:0009331
	Apr8g0971	628	Pfam	C-terminal domain of alpha-glycerophosphate oxidase	464	599	IPR031656	-
	Apr8g0971	628	Gene3D	-	498	620	IPR038299	-
	Apr8g0971	628	PANTHER	GLYCEROL-3-PHOSPHATE DEHYDROGENASE	1	627	-	-
	Apr8g0971	628	SUPERFAMILY	FAD-linked reductases, C-terminal domain	313	405	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr8g0971	Apr-Chr8	11676283	11684302	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr8g0971	23	628	Acyl Lipid Metabolism Gene Families	AT3G10370	81.683	0.0	1043

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr8g0971	K00111		-	gmx:100808564	1162.13

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr4g0505	4	4206864	4210901	Apr8g0971	8	11676283	11684302	PCT