Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0970 ATGTACGGTGGTGGTGAATCTGAATCTGATGACAGGCACAGTAACATGGGGACGAGGGTGGGTGGTGATGATGAAGAACAAGGTTCGTTCAAGAGTTGGGCCAAACAAACGGAAGAGAGCTATCAGTTACAACTAGCTCTCGCGCTTCGCCTTTCCTCTAACTCCGCTTCTTCTTCAGATCACTCCGCCCAGACACTCTCACACCACTTTTGGGTGAATGGTTGTTTGCAATACTGTGACAAAATTCTAGATGGCTTTTACCTAATCCATGGGATGGATGCTTATACATGGACACTAAGTACTGATCCGCAGAATGTTGGTATGATTCCATCATTTGAATCACTGATGTCAGTTGAACCTGGTGATGACTCATCAATTGTAGTGGTTGCTATAGATAAAGCCAGAGATCCTGGATTGAGAGAACTGCAAAGTAGGGTAGTAAGTCTCTCAAATAACTGGATTACTACAAAAGATGCGACTGATCAGCTTGCAAATCTTGTTTGCAGTAGGATGGGGGGAGTATCTTCAATGGAAGATAATTTAGGTACACGCTGGAAGGAATGCACCCAAATTCTTAAAAGCTGCCTGCATTCTGTCATTCTTCCAATTGGAAGCTTACCCATTGGCCTTTGTGTCCATCGAGCATTGCTGTTTAAAGTGTTAGCTGATGTAGTTAATCTACCATGTCGTATTGCAAAGGGCTGTAAGTATTGTAGGAAGGATGTGGGTGCTTCATGTATAGTGCAATTTGGTTCTGAGAGGGAGTATATAATTGATTTAGTTGGAAGGCCTGGGGCAACATGCCAACCTGATTCTTCACTGAATTCTGCATCTTCAATGTTGATCCCTTCACCATTATGTCATCCAAAGTTCAAGCCAGTTGAAACAGCTGAATTTACAAAGACACTAGCTCAAATGTATTTCTTGGACAGTCAAGCACTGCATCTTGTATTTGATACCACATCAGGAGCTGCTGTTAACCATAGTGAAAGAATGGATCTACAGAGAACTGAAGCTTTTGGGGCAGATTATGCTGGTGGAAACAGCCATTTGTTTACTTTGAGTCCTGGTATGGAGGAATATATGTCCTTCAGTGAAGCAAACCAATCTGTAAAGGATTATCCAATTCATGAAGTAGACCTTGACGAGGAGGATCTGGATATTCCATGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTCCTTCGCGCGGACTGGCGTGGTTCTGATGTTGCAGTGAAGATTCTTAAAGCACAAGGTTTTGATTCTGAACGATTTGAGGAATTTCTAAAGGAGGTCTCACTTATGAGGAGCCTACGACATCCAAACATTGTACTTTTAATGGGTGCAGTTATTCAACCCCCAAAGTTATCAATAGTAACAGAATATTTATCAAGAGGCAGTTTGTTCGAACTTCTGCGTATGCCTAATGTTGAATTATCACTTAGTGAGAAGCGTCGTTTGAGTATGGCTTTTGATGTGGCAAATGGAATGAATTATCTTCATCAAAGGAGACCTCCCATTGTCCATAGAGATTTGAAGTCTCCTAATCTTTTGGTTGATGATTCGTACACTGTTAAGGTGGGTGACTTTGGGCTTTCACGTACAAAGGCAAACACATTTCTTTCATCTAAAACTGCAGCTGGGACTCCTGAATGGATGGCACCAGAAGTCATACGAGGTGAACCATCAAATGAAAAATGTGATGTATTTAGCTTTGGTGTAATCTTGTGGGAACTAGTGACCTTGCAACAACCATGGAGACAATTCAATCCTTCACAGGTTGTGGCTGCTGTTGGTTTCATGGGAAAAAGGCTAGAGATTCCAAGCCATGTGAATCCTCAAGCGGCTGCCTTGATTGAGCTCTGCTGGGCCACTGAACCATGGAGACGGCCTTCTTTCTCCCATGTTATGAAATGTTTGCAGCAAATAATTGATGATGCTACAGGGTGA 1971 0.4247 MYGGGESESDDRHSNMGTRVGGDDEEQGSFKSWAKQTEESYQLQLALALRLSSNSASSSDHSAQTLSHHFWVNGCLQYCDKILDGFYLIHGMDAYTWTLSTDPQNVGMIPSFESLMSVEPGDDSSIVVVAIDKARDPGLRELQSRVVSLSNNWITTKDATDQLANLVCSRMGGVSSMEDNLGTRWKECTQILKSCLHSVILPIGSLPIGLCVHRALLFKVLADVVNLPCRIAKGCKYCRKDVGASCIVQFGSEREYIIDLVGRPGATCQPDSSLNSASSMLIPSPLCHPKFKPVETAEFTKTLAQMYFLDSQALHLVFDTTSGAAVNHSERMDLQRTEAFGADYAGGNSHLFTLSPGMEEYMSFSEANQSVKDYPIHEVDLDEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKAQGFDSERFEEFLKEVSLMRSLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLFELLRMPNVELSLSEKRRLSMAFDVANGMNYLHQRRPPIVHRDLKSPNLLVDDSYTVKVGDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGEPSNEKCDVFSFGVILWELVTLQQPWRQFNPSQVVAAVGFMGKRLEIPSHVNPQAAALIELCWATEPWRRPSFSHVMKCLQQIIDDATG* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0970 656 SMART serkin_6 393 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0970 656 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 366 654 - -
Apr8g0970 656 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 22 336 - -
Apr8g0970 656 MobiDBLite consensus disorder prediction 1 32 - -
Apr8g0970 656 Pfam Protein tyrosine and serine/threonine kinase 394 647 IPR001245 GO:0004672|GO:0006468
Apr8g0970 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Apr8g0970 656 Gene3D Phosphorylase Kinase; domain 1 386 471 - -
Apr8g0970 656 SUPERFAMILY Protein kinase-like (PK-like) 374 647 IPR011009 -
Apr8g0970 656 PRINTS Tyrosine kinase catalytic domain signature 467 480 IPR001245 GO:0004672|GO:0006468
Apr8g0970 656 PRINTS Tyrosine kinase catalytic domain signature 508 526 IPR001245 GO:0004672|GO:0006468
Apr8g0970 656 PRINTS Tyrosine kinase catalytic domain signature 555 565 IPR001245 GO:0004672|GO:0006468
Apr8g0970 656 PRINTS Tyrosine kinase catalytic domain signature 574 596 IPR001245 GO:0004672|GO:0006468
Apr8g0970 656 PRINTS Tyrosine kinase catalytic domain signature 618 640 IPR001245 GO:0004672|GO:0006468
Apr8g0970 656 MobiDBLite consensus disorder prediction 1 33 - -
Apr8g0970 656 Gene3D Transferase(Phosphotransferase) domain 1 472 655 - -
Apr8g0970 656 ProSitePatterns Protein kinases ATP-binding region signature. 399 420 IPR017441 GO:0005524
Apr8g0970 656 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 366 654 - -
Apr8g0970 656 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 22 336 - -
Apr8g0970 656 CDD STKc_MAP3K-like 399 645 - -
Apr8g0970 656 Pfam Ethylene-responsive protein kinase Le-CTR1 63 266 - -
Apr8g0970 656 ProSiteProfiles Protein kinase domain profile. 393 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0970 Apr-Chr8 11625144 11650588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0970 33 655 MAP Kinase Kinase Kinase AT5G03730 57.339 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr8g0970 PK_Tyr_Ser-Thr 1.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0970 K14510 - gmx:100807496 1122.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0286 4 2393552 2404862 Apr8g0970 8 11625144 11650588 PCT