Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0943 ATGAATAACTCTGCTTCAGATCAAAGTTTTATCTACGAGAGTGATGACGATGTGGAGAAGGAGCTGCACAGAGACGAACATGAAGGAAACGATTCGGATTATTCCAATGACACCAATGAAAACCAGTCAATGAGAAAACCCAGTAGTTACAACATTGCATGGCCCCAGAGTTACAGGCAATCCATTGATCTATATGGGAGTGTACCTTCACCAAATATTGGATTTCTGGGGCCCACATCACTGTCAAGACTTGGAAGTTCTTTTTTCTCTTCAAATTTGACAAGGAGGCACACTCTTGAAGTAGGATCACCAGTGAGAAAACCACTCTTGCAACCCACAGCAGATGAGCAACAGAGCAATCATGCCTTGCTTCCTCCACATCCTACTAGGAAGCCTTCAATTAGGAAAGAGGTTTCAAAGGTTTCTCATGAAGCTCACATTCCTGGGCAGTGCACTTATGGACAAGCTGTACTTAATGGGATAAATGCCCTTTGTGGAGTGGGAATCCTTTCAACCCCATATGCCCTTAAAGAAGGAGGGTGGGCTGGTCTTTCAATCTTGCTAGTATATGCAGTGTTTGCCTTTTATACAGGGTTGCTCTTGCGTTACTGCTTGGACAGTGGGTCTGACCTTGAGACTTATCCTGACATAGGCCAAGCAGCTTTTGGTACTACTGGCCGTGTTATCATTTCTATAATCTTATACATGGAATTATATGCTTGTTGCATTGAATACATAATTGTGGAGAGCGACAACTTGTCCTCATTATTTCCAAATCTACACCTTAGTTTGGGTGGAATTGAATTCAATTCACACATTTTGTTTGCGTTACTCACCACTGTGGCTCTTCTTCCTACAGTTTGGCTCCGTGACCTGCGCATTCTCAGTTACATCTCAGCTTGTGGAGTTATTGCAACGATTTTGGTGGTTCTCTGCTTGTTCTGGGTTTGCTTGGTAGACAAAGTTGACATTCAGACCCAAGGAACAACAACATTCAAACTTACAACTTTTCCTGTTGCTATGGGTCTCTATGGTTACTGCTACGCAGGGCATGCTGTGTTCCCAAACCTCTATACTGCCATGGCAAATCGGAAACAATTCCCTGCAGTGCTCTTAACATGTTTTGCTATTTGTACAGCTATGTATTGTGCTGTAGCTATTATGGGTTACTCAATGTTTGGGGAAGGAACACTCTCTCAGTATACTCTTAACTTGCCCAAACACTTGGTGGCCGCTAAGATTGCTGTGTGGACTACGGTGGTCAATCCATTTACCAAATATGCTTTGAGTCTATCTCCAGTAGCAATGTGTCTAGAGGAGTTGATACCAGCAAACAATCCCAAGTTTTACTTATATTCCATGCTAATCAGAACAGCGCTAGTGGTTTCTACCCTTCTTGTTGGTCTTTCAGTTCCCTTTTTCGGTTTGGTGATGTCATTGACTGGATCTTTACTCACAATGTTTGTTTCCTTGATTCTTCCCGCAGCATGTTTCCTAAGTATCAGGGGTGACCGAATCTCACGCTCTCAGATAGCGCTTTGTGCTACAATTATTATAGTAGGAGTTATATCATGTGGTTTTGGATCATACTCAGCCCTCTCCGAGATTATTCAGCAGTTGTTTGGATGA 1629 0.4279 MNNSASDQSFIYESDDDVEKELHRDEHEGNDSDYSNDTNENQSMRKPSSYNIAWPQSYRQSIDLYGSVPSPNIGFLGPTSLSRLGSSFFSSNLTRRHTLEVGSPVRKPLLQPTADEQQSNHALLPPHPTRKPSIRKEVSKVSHEAHIPGQCTYGQAVLNGINALCGVGILSTPYALKEGGWAGLSILLVYAVFAFYTGLLLRYCLDSGSDLETYPDIGQAAFGTTGRVIISIILYMELYACCIEYIIVESDNLSSLFPNLHLSLGGIEFNSHILFALLTTVALLPTVWLRDLRILSYISACGVIATILVVLCLFWVCLVDKVDIQTQGTTTFKLTTFPVAMGLYGYCYAGHAVFPNLYTAMANRKQFPAVLLTCFAICTAMYCAVAIMGYSMFGEGTLSQYTLNLPKHLVAAKIAVWTTVVNPFTKYALSLSPVAMCLEELIPANNPKFYLYSMLIRTALVVSTLLVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRGDRISRSQIALCATIIIVGVISCGFGSYSALSEIIQQLFG* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0943 542 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 22 539 - -
Apr8g0943 542 MobiDBLite consensus disorder prediction 113 132 - -
Apr8g0943 542 MobiDBLite consensus disorder prediction 1 47 - -
Apr8g0943 542 Gene3D Amino acid/polyamine transporter I 150 539 - -
Apr8g0943 542 MobiDBLite consensus disorder prediction 13 34 - -
Apr8g0943 542 Pfam Transmembrane amino acid transporter protein 152 530 IPR013057 -
Apr8g0943 542 PANTHER OS05G0424000 PROTEIN-RELATED 22 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0943 Apr-Chr8 11127458 11135311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0943 1 475 Amino Acid or Auxin Permease AAAP Family AT2G39130 65.909 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0943 K15015 - gmx:100798108 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1954 8 30157280 30166629 Apr8g0943 8 11127458 11135311 ECH
Apr8g0943 8 11127458 11135311 Apr8g0943 8 11127458 11135311 ECH