Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr8g0931 | ATGCAACCCATCGCAGGTTCATCTGGTTCATCTACAACTCAGGATTTGAAGGAGGAAGTGGATTCTCGGTCTATCTATGTTGGAAATGTTGACTATGCATGTACATCTGAAGAAATCAGGCGACATTTTCAAGGATGTGGAGCTGTGAACAGAGTGACAATTCTGACGACCATATCTGGTCAACCAAAAGGATTTGCTTATGTTGAGTTTGTTGAGGTTGATGCTGTTCACAATGCTCTCTTTTTAAATGAATCAGAACTGCATGGTCGGAAACTGAAGGTCTGTGCCAAGCGTACAAACATTCCTGGAATGAAACAGTATTCTGGGAGAAGACCTTTTGCTTCAAGATATAGAAGGCCTTCATTCCATCCTCAACCTGGTTATGGAAGGTTTCCAAGGTTTGGCCGACCCATGCAATATTACAGGCCATACTAA | 435 | 0.4253 | MQPIAGSSGSSTTQDLKEEVDSRSIYVGNVDYACTSEEIRRHFQGCGAVNRVTILTTISGQPKGFAYVEFVEVDAVHNALFLNESELHGRKLKVCAKRTNIPGMKQYSGRRPFASRYRRPSFHPQPGYGRFPRFGRPMQYYRPY* | 145 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr8g0931 | 144 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 3 | 141 | - | - | |
Apr8g0931 | 144 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 25 | 93 | IPR000504 | GO:0003723 | |
Apr8g0931 | 144 | SUPERFAMILY | RNA-binding domain, RBD | 18 | 126 | IPR035979 | GO:0003676 | |
Apr8g0931 | 144 | SMART | rrm1_1 | 24 | 95 | IPR000504 | GO:0003723 | |
Apr8g0931 | 144 | PANTHER | POLYADENYLATE-BINDING PROTEIN 1-LIKE | 3 | 141 | - | - | |
Apr8g0931 | 144 | Gene3D | - | 6 | 133 | IPR012677 | - | |
Apr8g0931 | 144 | CDD | RRM_II_PABPs | 24 | 95 | - | - | |
Apr8g0931 | 144 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 23 | 99 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr8g0931 | Apr-Chr8 | 10846214 | 10857718 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr8g0931 | 24 | 95 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 36.709 | 6.75e-09 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr8g0931 | K14396 | - | vvi:100242522 | 207.608 |