Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0917 ATGCAAACCTTTGAACCCAATTTCAGTTTTTGCACCTCAAACACCTTAAAAGCCTCAATGTCATCACAACCAATGCTAAGTTCAATTTCACAAAACATGAGCTCTGATATTAGTGTCAATGATTACTTGCTACCCCAAGAAGTTCAAGTTCCCATCGGCAACAATAACATACCAATGAACCATACCCACCTTCAAATGCCTCAAATCACCTCTTTCTCCAAGCCTCCAAGGTCATCAAATCTTAGCAACCGCAAACCCTCCTTAAACATCACAATCCCTTCCATAACCTCCGGTCTCAAAACAGCCATGTCACAACAGGTGCAAACAACAACCATCTACAATAACAACCAAAGTTCTTCTTCTTCTTCCTCAGATAATGACAACAACAAAGAGGAGAAGCATTATAGAGGGGTTAGAAGGAGACCATGGGGAAAGTTTGCCGCAGAGATACGTGATCCCAATAGAAAAGGTTCAAGGGTATGGCTTGGAACCTTTGACACAGCCATAGAAGCTGCTAAGGCTTATGACAAAGCTGCTTTCAAGATGAGAGGTAGCAAAGCTATTTTGAACTTCCCTTTGGAGGTTGGAGAGTCTTCAGAACCAATTTCAAGTTGCATCAAGGTTGGTGAAAAGAGAGGAAGAGAAGAAGACAGTGAAGGGAAAAGCAACTATGTGGAGTATAATAACAATAACAATAACCATAATAATAAGCATGTGAAGAAAGAAGAGTGTTGCCCAAGTCCCAAAGGGGTGTGTCCTTTGACTCCCTCATGTTGGAAAGGCTTTTGGGACACTGATGTTATGGGAACCATCTTTAGTGTGCCTCCTTTGTCACCCTTGTCTCCTCTAATGGTTGTTTGA 861 0.4181 MQTFEPNFSFCTSNTLKASMSSQPMLSSISQNMSSDISVNDYLLPQEVQVPIGNNNIPMNHTHLQMPQITSFSKPPRSSNLSNRKPSLNITIPSITSGLKTAMSQQVQTTTIYNNNQSSSSSSSDNDNNKEEKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLEVGESSEPISSCIKVGEKRGREEDSEGKSNYVEYNNNNNNHNNKHVKKEECCPSPKGVCPLTPSCWKGFWDTDVMGTIFSVPPLSPLSPLMVV* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0917 286 MobiDBLite consensus disorder prediction 112 139 - -
Apr8g0917 286 SUPERFAMILY DNA-binding domain 134 194 IPR016177 GO:0003677
Apr8g0917 286 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
Apr8g0917 286 PRINTS Ethylene responsive element binding protein signature 174 194 IPR001471 GO:0003700|GO:0006355
Apr8g0917 286 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 26 270 - -
Apr8g0917 286 Gene3D AP2/ERF domain 133 194 IPR036955 GO:0003700|GO:0006355
Apr8g0917 286 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 26 270 - -
Apr8g0917 286 ProSiteProfiles AP2/ERF domain profile. 134 192 IPR001471 GO:0003700|GO:0006355
Apr8g0917 286 SMART rav1_2 134 198 IPR001471 GO:0003700|GO:0006355
Apr8g0917 286 CDD AP2 133 192 IPR001471 GO:0003700|GO:0006355
Apr8g0917 286 MobiDBLite consensus disorder prediction 212 233 - -
Apr8g0917 286 Pfam AP2 domain 134 184 IPR001471 GO:0003700|GO:0006355
Apr8g0917 286 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0917 Apr-Chr8 10305865 10307198 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0917 131 279 AP2-EREBP Transcription Factor Family AT5G51190 57.143 3.31e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr8g0917 AP2 5.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0917 K09286 - gmx:100795866 347.821