Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0916 ATGGGTTGTAATTATGAAGAAAACCCTCTTTCAAAATGTTCACCTCAACAAGCAGAAGACAATGCATGCCTATCAGCAATGCTACTTAGCTTTAGTCCAATGGTTTATAGTGCAGTATTAAATGCTGCACTTGAGCTGAATTTGTTTCAGATCATAGCAAAAGCAAGCCCACTTTGTGTTTCAGCCTCTGAGATTGCTTCTCAACTTCCCACACAGCACAAAGAATTGCCTCGAAGGCTTGATCGCATGCTATGCCTCCTTGCTAGTCACTCTCTTCTCACATGTTCCACACGCATCAATGAAGATGGTGCCATGGAAAGAGTTTTTGAACTCTCACTTGCTGGCAAGTTCTTTCTCAATGATCAGACCAATGGCTCTGTGGCTTTGTTCTCAACATTTGTCAGTCATCGAACTGTCGCTGATGCATTCCAAAATTTTAAGGAGGTACTTCTAGACTGTGATAAAGGCCTCTACATGAAAGTTCATGGAATGCCTGTTTATCAAGGCATACAGACTTATCCAGCGTGGAATCGTACTTTTAACGAAGCAATGGCCAATATGTGCACAATGGAGATGAGAAAGATACTTGAAACATACCAAGGATTTGAAGGAACACCATTGCTGGTTGATGTAGGAGGTGGAGTTGGGCAAAGTTTGAACATGATAATCTCCAGGTATCCTTCAATAAAGGGTATCAACTTTGATTTGCCACCAGTAATACAACAAGCTCCATCTTATCCAGGGATTCAGCATGTTGAAGGAGACATGTTCGAAAGTGTTCCAAAAGGTGATGTCATACTATTGAAGGCCGTATTGCACAATTGGACGGATGAAAATTGTTTGAAAGTTCTAAACAACTGCTACAAAGCTTTGTCACCAAATGGTAAGGTGGTGGTTGTGGACTTGATAGTCCCAGAAACAATTCAGTGCATCGACACTGATAAGATGGTTACTGGCTTCGACAACCTCATGTTTCTCGACGGTGGAAGCGAAAGAACCGAGAAAGAATTTAAGAATTTATGCCAACGTTCTGGATTTTCCAGTTTCCAAGTTGTTTGTCGTGCCTTCACTGCTTTGGGAGTAATGGAATTTTATAAATGA 1101 0.4124 MGCNYEENPLSKCSPQQAEDNACLSAMLLSFSPMVYSAVLNAALELNLFQIIAKASPLCVSASEIASQLPTQHKELPRRLDRMLCLLASHSLLTCSTRINEDGAMERVFELSLAGKFFLNDQTNGSVALFSTFVSHRTVADAFQNFKEVLLDCDKGLYMKVHGMPVYQGIQTYPAWNRTFNEAMANMCTMEMRKILETYQGFEGTPLLVDVGGGVGQSLNMIISRYPSIKGINFDLPPVIQQAPSYPGIQHVEGDMFESVPKGDVILLKAVLHNWTDENCLKVLNNCYKALSPNGKVVVVDLIVPETIQCIDTDKMVTGFDNLMFLDGGSERTEKEFKNLCQRSGFSSFQVVCRAFTALGVMEFYK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0916 366 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 366 - -
Apr8g0916 366 CDD AdoMet_MTases 208 304 - -
Apr8g0916 366 Pfam Dimerisation domain 39 88 IPR012967 GO:0046983
Apr8g0916 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 366 IPR016461 GO:0008168
Apr8g0916 366 Pfam O-methyltransferase domain 151 347 IPR001077 GO:0008171
Apr8g0916 366 PIRSF O-mtase 4 366 IPR016461 GO:0008168
Apr8g0916 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 360 IPR029063 -
Apr8g0916 366 SUPERFAMILY "Winged helix" DNA-binding domain 21 122 IPR036390 -
Apr8g0916 366 Gene3D - 4 118 IPR036388 -
Apr8g0916 366 Gene3D Vaccinia Virus protein VP39 120 366 IPR029063 -
Apr8g0916 366 PANTHER O-METHYLTRANSFERASE 1 366 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0916 Apr-Chr8 10254354 10257019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0916 16 366 Monolignol Biosynthesis Gene Families AT5G54160 45.352 8.39e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0916 - - gmx:100784030 580.867