Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0915 ATGACAACAGCAGAAGAAGCTTCAAACTTGGATCTCATATGCCAACATCTCTTAGGGGATCACAACCTCTCAGATTCTTTCCTTACCAACCTCCTTCCTATAAAACTGGAAGAAGACCCTTTAGAATTTGATTTCAGTTCATATATTTCAGACACCACCACCTTCTGCACTTTCCTTGAAGGCTATGATTTGGTAGCAGACATGGAATTCATTGATCAAAATTCTTCTCCAAACCCCTTAAAGGAAGAAGCAAAGAATGAACCAATGGTGTCAGAAGAGAAGAAATCAGAATATGATATTGAAGCAAGGCGTTATAGAGGGGTTAGAAGAAGGCCATGGGGCAAGTTTGCTGCTGAAATCCGTGACCCTTCAAGGAAAGGTTCTAGAGTTTGGCTTGGAACATTTGACACTGAAATTGATGCTGCTAAGGCTTATGATTTTGCTGCTTTCAAGATGAGGGGTCAAAAAGCCATATTGAACTTCCCTCTTGAGGCTGGAGTTTGTGATCCTAAGCCAAATTGTTGTGGAAGGAAGAGGAAAAGACAAGAATTGAAGCTACCACAAGTTCAAGTTCATCACGGTGTGTCCTGA 591 0.4129 MTTAEEASNLDLICQHLLGDHNLSDSFLTNLLPIKLEEDPLEFDFSSYISDTTTFCTFLEGYDLVADMEFIDQNSSPNPLKEEAKNEPMVSEEKKSEYDIEARRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDTEIDAAKAYDFAAFKMRGQKAILNFPLEAGVCDPKPNCCGRKRKRQELKLPQVQVHHGVS* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0915 196 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 183 - -
Apr8g0915 196 MobiDBLite consensus disorder prediction 75 95 - -
Apr8g0915 196 ProSiteProfiles AP2/ERF domain profile. 104 162 IPR001471 GO:0003700|GO:0006355
Apr8g0915 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 5 183 - -
Apr8g0915 196 CDD AP2 112 162 IPR001471 GO:0003700|GO:0006355
Apr8g0915 196 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Apr8g0915 196 PRINTS Ethylene responsive element binding protein signature 144 164 IPR001471 GO:0003700|GO:0006355
Apr8g0915 196 Pfam AP2 domain 104 154 IPR001471 GO:0003700|GO:0006355
Apr8g0915 196 Gene3D AP2/ERF domain 103 164 IPR036955 GO:0003700|GO:0006355
Apr8g0915 196 SMART rav1_2 104 168 IPR001471 GO:0003700|GO:0006355
Apr8g0915 196 SUPERFAMILY DNA-binding domain 104 164 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0915 Apr-Chr8 10214487 10215492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0915 1 184 AP2-EREBP Transcription Factor Family AT5G07580 41.206 1.07e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr8g0915 AP2 6.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0915 - - ccaj:109813158 262.307