Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0905 ATGAATAGAACTAATTACAATTCTAACAACAGTGGCGTTTCACAAGATTTGGATGGATCATATGCATATTCTTCTATTGGATTATATATTGGGTTTCTGGGAGTGATCACTCTCATAGGTTTCACTTTATATTATTGTAGCCGTGCTTTGCAAAATGGGAATGGAATTGGCACAGGCAACAGCAGCATGGAGCCAGATTACAAGGACTCCGAGTGGTTGAAGCTTTTACCTCATTGTGGTCACTTGTTTCACATAGATTGCATTAATAAGTGGGTGCACGTAAACCTTTCATGCCCCATGGGTCGAAATTCACCACTCCCAATTCCTCTTGCTCAAGTTGCTCCTTTAGCAACAAGGCGTGGTGATTGA 369 0.4119 MNRTNYNSNNSGVSQDLDGSYAYSSIGLYIGFLGVITLIGFTLYYCSRALQNGNGIGTGNSSMEPDYKDSEWLKLLPHCGHLFHIDCINKWVHVNLSCPMGRNSPLPIPLAQVAPLATRRGD* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0905 122 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 106 IPR013083 -
Apr8g0905 122 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 66 112 - -
Apr8g0905 122 SUPERFAMILY RING/U-box 67 102 - -
Apr8g0905 122 Pfam RING-H2 zinc finger domain 72 101 IPR024766 GO:0008270
Apr8g0905 122 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 66 112 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0905 Apr-Chr8 10003973 10004485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0905 66 118 C3H Transcription Factor Family AT2G35910 50.877 8.16e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0905 - - aprc:113871451 261.536