Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0902 ATGTCCATGCTTTTGTTGCTCACTTTGCTCCTAATCCAAACTCAAAGTGGTGAAAACACTGTTATTAACCACCCCTTCACTTTCTCCTTTGTTTCTTTTAACCCTGAAAGTTGCACCAATGGTGAATTGCTTTGTATGGGATCAGCCACTGCAGGAAATGGGTATTTAAGTCTCACACCAGATCCACAACAAAGTAGCAATTCAAATTTACCACTATCTTCCACAACCAACAACGTGGGAAGGGTTCTGTACCCTCATCCTGTTCATGTTTGGCCAGCAATTATCTCTACCACCTTCACTATTAGGATAACTCCCTTTTCAAAAAATTCAACTTTCTCTGGTGATGGAATGGCACTAGTGTTTGCACAGGATAATAGGCCCTCACCAAATGCTAGCTATGGCTCATACCTTGGCATGATTGATCGCTCTACACATGGGGGTGATTTTCGTCAAATAGCTGTGGAGATAGACACTTTCATGAATGAATTTGATCCAGATGAAAATCACATTGGGATAGTCACTACAAGCATCACAAATCCACTAGCATTTGAGAGTCTCAATAGCACTGGCATTGACCTCAGAAGCGGAAGAGACATTGAGGTCAAAATTGACTATGATGGATGGAACAAAATGATTTTTGTCTCTCTGGGATACTCTGAAGGCCAATTAAAGAGTGTCCTTAACCATTCAATTAACCTTCCTGACATAATTCCAAGCTCCATTTATGTAGGTTTCACAGCCTCCACTGGCAACAATTTTCCTGAAAGCCATCAAGTTCTCAATTGGGTGTTCACATCAGTGCCACTGCCTAGTCTTTCAGTTCAGCCAACTAAAATTGGTTCCATCAAGACCATATTGATAATTGTCATGCCAGTTTGTGTGTCGGGGTGCTTATTTCTCTTTATTTGGTTAGTTTGGAAAAGATATGCGAGGGGCAACAAGGAGGATATAGAAAGCTTATCAAGGAAGGCTGCAGATATGCCCAAGATGTTCACTTACAAGCAACTATCAAAGGCCACATGCAACTTCAGCAGAGAAAATTTTTTGGGCAGAGGTGGTTTTGGTAGTGTTTATAAAGGCTTCATATTAGACTCTGGGAAAACTGTAGCAGTAAAGCGGATTTCAGCATCTTCTAAGCAAGGTGAAAGAGAGTTCTTAGCAGAAATATGCACCATCGGGCGTCTTAGGCACAAAAACATTGTGCAGCTCCAAGGCTGGTGCAATGAAGGCAAAAGACTTCTATTGGTTTATGATTACATGCAAAATGGAAGCCTTGACTGCTTCATAGGAAAGGACACTCTAAACTGGCATGCAAGGCACAAGATATTGACAGGATTGGCATCATCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTGTTGTTCACAGAGATGTTAAGCCCAACAATGTCATGTTGGACACTGATTATAATGCTCATTTAGGAGATTTTGGGCTAGCAAGGCTACTCAAAAATGAAAATTCAGTTACTACAAATCTAGCTGGAACTCCAGGATATTTGGCCCCAGAAGTAAGCTTTACTGGGAAGGCTACACCTGAATCAGATGTGTATAGTTTTGGCATGGTAGTACTTGAAGTCATATGTGGGAAAAGGTCAAAATGGATCAAGGAAGAGAACAGTTTTTTAGACTGTGTGTGGAATTTGCATGCTCAAAATGCATTGCTTGAGTGTGTAGATAAACTACTAGAAAACCAATTTGATGAGGTAGAAGCCAAAAGGGCATTGATGGTTGGGTTGGCTTGTTTGCATCCAGATTCCATGTTCAGGCCAAGGATGAGAAAAGTGGTGAACATTCTTCAAAACCCAAATGAACCTTTAATGGAATTACCAGGAGTGAGACCCACTGGAGTTTATCTATCAGTTTCTTCTTCTACTACTACATCAACATCTGACTTTGGGTCTAGAGGCGATCTACAACTTCAATCATCTACAAAATCATTGAAAGAAATTTAG 1974 0.4068 MSMLLLLTLLLIQTQSGENTVINHPFTFSFVSFNPESCTNGELLCMGSATAGNGYLSLTPDPQQSSNSNLPLSSTTNNVGRVLYPHPVHVWPAIISTTFTIRITPFSKNSTFSGDGMALVFAQDNRPSPNASYGSYLGMIDRSTHGGDFRQIAVEIDTFMNEFDPDENHIGIVTTSITNPLAFESLNSTGIDLRSGRDIEVKIDYDGWNKMIFVSLGYSEGQLKSVLNHSINLPDIIPSSIYVGFTASTGNNFPESHQVLNWVFTSVPLPSLSVQPTKIGSIKTILIIVMPVCVSGCLFLFIWLVWKRYARGNKEDIESLSRKAADMPKMFTYKQLSKATCNFSRENFLGRGGFGSVYKGFILDSGKTVAVKRISASSKQGEREFLAEICTIGRLRHKNIVQLQGWCNEGKRLLLVYDYMQNGSLDCFIGKDTLNWHARHKILTGLASSLLYLHEECGNPVVHRDVKPNNVMLDTDYNAHLGDFGLARLLKNENSVTTNLAGTPGYLAPEVSFTGKATPESDVYSFGMVVLEVICGKRSKWIKEENSFLDCVWNLHAQNALLECVDKLLENQFDEVEAKRALMVGLACLHPDSMFRPRMRKVVNILQNPNEPLMELPGVRPTGVYLSVSSSTTTSTSDFGSRGDLQLQSSTKSLKEI* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0902 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Apr8g0902 657 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Apr8g0902 657 Gene3D Transferase(Phosphotransferase) domain 1 420 614 - -
Apr8g0902 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 267 IPR013320 -
Apr8g0902 657 CDD STKc_IRAK 349 608 - -
Apr8g0902 657 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Apr8g0902 657 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 31 636 - -
Apr8g0902 657 Pfam Legume lectin domain 27 267 IPR001220 GO:0030246
Apr8g0902 657 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Apr8g0902 657 PANTHER - 31 636 - -
Apr8g0902 657 Gene3D - 25 277 - -
Apr8g0902 657 MobiDBLite consensus disorder prediction 632 657 - -
Apr8g0902 657 Pfam Protein kinase domain 344 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0902 657 ProSiteProfiles Protein kinase domain profile. 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0902 657 SUPERFAMILY Protein kinase-like (PK-like) 327 630 IPR011009 -
Apr8g0902 657 SMART serkin_6 343 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0902 657 CDD lectin_legume_LecRK_Arcelin_ConA 26 266 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0902 Apr-Chr8 9965770 9968979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0902 31 622 Receptor kinase-like Gene Family AT5G55830 37.422 3.21e-117 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr8g0902 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0902 - - gmx:102665030 999.193