Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0901 ATGGGAATGGGCGTGGCAAGTGGTGATTCGATGCTGAGGGAGAAAGCGTTAGCGATGAGAGAGTCTCTGGAGCGAAGCCAAACCATCACCGACGACGTCGTTTCAATTCTTGGCTCCTTTGACCACCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCTACGCAGATCAGAACGCATTCTATTCGGAAAGCTCATGAGAATATTGATAAGACTTTGAAGGCTGCAGAGGTCATATTGGCTCACTTTGATCAGTACCATCAGGCAGAAGCAAAAATAGTTAAAGGACCACATGAAGATGTGAAGAACTATCTTGAAGCAATTGATCAGCTGAGAAGCAACATTAGATTTTTTGGCAGCAAGAAGGGTTTTAAGAGTGACGATGGTATTGTCAGCCGTGCTAGTAATTTGATAACTAAAGCTATTTCTAAGCTAGAAGATGAGTTTAAGCAGCTCTTATCATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGATTGCCTTCCAAACTCAATGAGACCTTCATCAGCATCACCTGGCCGTGATGGTGATCCTAGTGGCAAGAATCATTCTTCTAATATCCATTCTGAGCCACATAAAAATAATGTTGATGCTGTTGTATACACGCCCCCTGATCTTATGCCACCAAGAATTTTGCCATTGCTCTCTGATTTAACCCAGCAAATGGTTCAAGCTGGTCATCAACAACAGTTGCTCAAAATATACAGAGATACCCGTTCAAATGTATTGGAAGAAAGCCTGCAAAAACTTGGAGTTGAGAAACTTAGCAAAGATGATGTCCAAAAGCTACAATGGGAAGTATTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTCAAATTGTTGTTTGCTGGTGAACGGAAAGTTTGTGATCAGATATTTGAAGGATTTGATTCACTCAGTGATCAGTGTTTTGCTGAAGTAACTACCAACAGTGTCTCCATGCTACTTAGTTTTGGAGAAGCAATTGCAAAAAGCAAGAGATCACCTGAAAAGTTATTTGTACTTCTGGACATGTATGAAATATTGCAAGAGATCCATTCAGAGATTGAAACAATCTTTAAAGGAAAAGCTTGCACCAAAATAAGAGAAGCTGTACTGGGTTTGACAAAACAGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACCGATGGAACTGTCCATCCTTTGACAAGTTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGTTCTACCTTAACCCAACTTTTCCAAGGTTTTGAAGCTGAAGGCAATTCTTCACAGTTAGCATCTGTAACAATGCAAATATTGCAAGCTCTTCAAACCAATTTAGATGGAAAATCAAAGCAGTATAGGGACCCTGCTTTGACACACCTATTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTCGAAGGTCTGAAGCAAAGGATTTGTTGGGGGATGATTGGATACAACGACATAGGAAGATTGTGCAACAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTCCCTGTCTATTCAGGGCCTCATCTCATCAGGTGGTGGGGGTAGTACTGCAGGCGGTGATGGGGGCAGTAGTGGTGCTTCAAGAGCTATTGTTAAAGAGAGGTTTAAGACATTCAATACTATGTTTGAGGAACTTCATCAGAAACAAACTCAGTGGACAGTACCTGATGCAGAGTTGCGAGAGTCTCTTATTCTGGCAGTTGCTGAAGTCTTGTTGCCTGCCTACAGATCGTTTGTGAAACGTTTTGGGCCTCTAGTGGAGAATGTAAAGACTACTCAAAGGTACATCAAATACACTGCAGAAGATCTAGAGCGAATCTTGGGTGAATTTTTTGAAGGAAAAAGCATGAATGATTCCAAGCGGTAA 1959 0.414 MGMGVASGDSMLREKALAMRESLERSQTITDDVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILAHFDQYHQAEAKIVKGPHEDVKNYLEAIDQLRSNIRFFGSKKGFKSDDGIVSRASNLITKAISKLEDEFKQLLSSYSKPVEPERLFDCLPNSMRPSSASPGRDGDPSGKNHSSNIHSEPHKNNVDAVVYTPPDLMPPRILPLLSDLTQQMVQAGHQQQLLKIYRDTRSNVLEESLQKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSDQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHSEIETIFKGKACTKIREAVLGLTKQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLTQLFQGFEAEGNSSQLASVTMQILQALQTNLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSGGGGSTAGGDGGSSGASRAIVKERFKTFNTMFEELHQKQTQWTVPDAELRESLILAVAEVLLPAYRSFVKRFGPLVENVKTTQRYIKYTAEDLERILGEFFEGKSMNDSKR* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0901 652 MobiDBLite consensus disorder prediction 165 201 - -
Apr8g0901 652 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 648 - -
Apr8g0901 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 648 IPR004140 GO:0000145|GO:0006887
Apr8g0901 652 Gene3D Exocyst complex component Exo70 186 652 - -
Apr8g0901 652 Gene3D Exocyst complex component Exo70 76 180 - -
Apr8g0901 652 MobiDBLite consensus disorder prediction 185 199 - -
Apr8g0901 652 SUPERFAMILY Cullin repeat-like 78 643 IPR016159 -
Apr8g0901 652 Pfam Exo70 exocyst complex subunit 281 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0901 Apr-Chr8 9949948 9963544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0901 3 652 EXO70 exocyst subunit family AT5G03540 71.344 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0901 K07195 - gmx:100775958 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0901 8 9949948 9963544 Apr8g0901 8 9949948 9963544 ECH
Apr4g0136 4 1170614 1172976 Apr8g0901 8 9949948 9963544 PCT