Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0897 ATGTTAATGATGGCAGAGCAAATTCCATTTGGTGTTGCTTCCAATCTCATTGACAGGTTGGCTTCAGCTGAATTTCTTGAATTTGGACAGAAGTATGATGTGATGGAAGAGTTGGAAGAGCTTAAGAACACAATTGAATCCATCAACGATGTGCTCCTTGATGCCGATAATAAACAAGAACAAGCTCGCGTGCGAAATTGGATAAGAAGGTTCAAAAAAGCACTTCATTATGCAGATGACTTCATAGATGATCTTGCTATTGAGTATATGAGACACAACATGGATGCAGGACAAGGAAAAGAAGTGACAAAGGTACTTTATCCCCTTTCATCTTCAAATCGAATTGATTTTCCCATCCAAATGGCTGATGAAATAAAGAAAACACGAGAAAGTTTTAATGATGTTGTAGAAGACACGTTTAAATTGAATTTAAGCCCAAGAACTATGGTGGTTAAGCAAACTAATAGTGAATGGAGGGAGACAGATTCTGTGTTAGAATCAAATATTGTTGGAAGAAATGACAGTAGAAAGGAAATTATAACTTTGTTGATGGAATCACATAAAAACCAAAATATTTCTGTGATTGCCATTGTAGGCATTGGTGGTGTGGGGAAGACAACTCTTGCTCAATTAATATATAATGATTTGGGAGTGCAGAATTCTTTTGAAAAGCGAATGTGGGTGTCTGTCTCTGATAACTTTGATGTAAAGATCATTGTAAGGAAAATATTAGAATCATGTACTTGTAGCCAAATTGAAGACAAGTTATCATTAGACAACTTGCAAAAAATGCTACGTGAAGAATTAAGTGGTAAGAAATATTTGCTAGTCCTTGACGACATTTGGAATGAAAATGATAGCAAGTGGTCTAAATTGAGAACTTATTTGATGTTTGGTGCTCAAGACAGTAAGGTCTTAATGACAACTCGAAGTGAAATTGTAGCAAAGACAATGAGTGCAAGCACTTCCTATCATTTGAATGGTTTGACTGAAGAAGAATCTTGGAATCTGTTAAAGAACATTGCATTTGAGGATAATACCGAAGGATTGAATCAAAATCTAGAATTAATTGGTAAAGAGATAGCGAAAAAATGTAAAGGGGTTCCATTGGCAATTAAAACACTGGGAGGCTTGTTACGAGGACAAAATGAAGAAAGTGAATGGGAAGATGTTTTAATTGGTGACTTCTGGAAATTATCTGAAGAGCAAGACAGTATCATGCCAATTCTAAAACTCAGTTACCAAAACTTGTTGCCTGAAATGAGACAATGTTTTGCTTATTGCTCTTTATATCCCAAGGATTCGAAAATTTTAAGGGATGAATTGATTCAGTTATGGATGGCACAAGGTTACCTCAAATGTTCAACTAAAAAGAAACACATGGAAGATGTCGGTAATGAATTTATAAATATTTTTTTGATGAACTCATTTTTTCAAGATCCTGTCAAAAGTAGATATGGTGAGATCACTAGTTTCAAAATGCATGATTTAATGCATGATCTTGCAATGCTTGTTGCTGGCAATGATTATTGTTTCTTAGATGATAAGGCAGAAAATCTAGAAGGCAGACCTATGCACGTATCATTGGAATTCAAGGCCATTCATTTACTGAAATCATTAGATCCCAGCAGGCTACGAACTTTGATTTTGAGGGATGGCAATGAGGGAGAATTCTCTGTTATTTCAAGCTTTAAGTACTTACGCATCTTGAAGATGCCGTATTATTCTTTACTTGAGTTGTCTGATTCAATTGAAAATTTGAAGCATTTAAGATATCTCCAGTTTTTCCCTGAGGAAGGACAAATAAGTCTTTTCAAATCTATAAGTAATCTTATTTGCTTACAAACGTTAAAATTGGGTCGATACGACGATGAATTTGTTTCACAACTCGTCACAAAATTAGTCAATTTAAGATGCCTTGATATTGATATTGTTCCTTTGCGATCCTTAAGGGGGATGGCAGTTGGGTTGGGAAAATTGTCTTCGTTGCAATTCTTATCCAACTTTCTGGTGGGAGAAAGCCAAAATAGAAAATATGGCACCCTAAATGAATTGAAGGACTTAAACCTCAGAGGAGAATTAACAATTAACTATCTGAACAGGGTAAGAGACGCGACTCAGGAATCACAGGATGTAAATTTAAAAGAAAAAGATCTCCTTCAATCCCTGTGTCTAAAATGGCAAGATGAAGATGAAATTGATTACAGTGACAGCTCACAATTATTAAAAAACCTTCAGCCCCACCATAATCTTAAGCAATTGAACGTGCTGGGGTATCCAGGCATCGTTTTCCCAAATTGGCTTTCTTGCCTCACAAATGTTGTTGAAATCCAGCTGAATTGGCTTCTCAATTGCCGATGTCTCCCACCGTTGGAACGTCTCCCATCCCTGAAGTCACTTCGGTTAGACGGTCTTCATGAATTGGAATACATATATCTTGAAGATGGTTTTGCAGTAACATTCTTCCCGTCTTTGGAGATCCTCAAGTTACGTGGTTGTCCCAATCTTAGGGGATGGAAGAGACTTGGAGATGATATCATTGATTCACATCATCACTCCTTACCTCCGTTTCCTTTTATTTCCCAGCTACAAATCTCTCTCTGTCCAAAGTTGACTTGCATGCCTACTTTTCCAAATGTTGAGGATTTGTATTTGCATGCTTGTGGTGTGGAGCCATTAATAGCCACGTTAAACACAACTGCGTCAACATGTTCAGATGACTCGTCTTCCTACACTGCTCCTCTTTCCATGCTCAAACGCCTGTGCTTTTATCATCATCCTCTAAATTTACCAAAGCGTTGGATGCAAAATCTGACTTCTCTCGGGTTTCTTAAACTTGGATGGTCTGAAAGTGAAGCACTTGAGGAATTTGAAACTTGTTTTAATGACAACACCAACTGCCTTACTTCTCCACGACAAATAATCATAAGACTATGTAAAAACCTAAAGACTTTGCCAGATTGGATTTGCAACATCTCATCACTTGAGCATATCAAGATCTCCGATTGCCCAAATTTGGCATCGCTGCCCGAAGGAATTACTCGTCTTACCAACTTAAAGATCTTTGAGGTCAGGAATTGTTCGCTCTTACTTAAAGAATGCCGAACAAAAACGAGTGTTGTTAGCACCCAAATTGCACACATCCCAGAAATCATCCTTAGCGGTAAAGTTGTCAACAGTTTGTGGTGGGTGCCAAATATGGCAAATACTATAAGGAAGGGTGATGAGCCTGTGTCTGGTGAAGGGACAGTTTTACAAAAGCTTAATCTATGCAACATTGGAGGCCTTATTTGTTGGGTAGAAGTTTCGTATTCAGATCAAAAGAGTTTGGGGCATCTTTTACAGCAGCATATCACCATTGTGGCCCAACAGAATTGGCTGGCAAAGCTCTTGGGCTATCAGTTTGAGATTATATACAAGCCTGGTCCTGAGAATAAAGCTGTGGACTCCTTGTTTAGAATGTTTGAAGATGGCGAGTTAAGGCAGATTGCCTCTTTTTCCGTTTGGTTACAGGACCAGCACATTAGCAAGGAAAAAGAATCTTACCCTTTCTTGAAACAGGTGGAGCATGACTTATTGCAGGATGCTCATTCTCGTCCTGGGTTCAGTTTATAG 3615 0.3793 MLMMAEQIPFGVASNLIDRLASAEFLEFGQKYDVMEELEELKNTIESINDVLLDADNKQEQARVRNWIRRFKKALHYADDFIDDLAIEYMRHNMDAGQGKEVTKVLYPLSSSNRIDFPIQMADEIKKTRESFNDVVEDTFKLNLSPRTMVVKQTNSEWRETDSVLESNIVGRNDSRKEIITLLMESHKNQNISVIAIVGIGGVGKTTLAQLIYNDLGVQNSFEKRMWVSVSDNFDVKIIVRKILESCTCSQIEDKLSLDNLQKMLREELSGKKYLLVLDDIWNENDSKWSKLRTYLMFGAQDSKVLMTTRSEIVAKTMSASTSYHLNGLTEEESWNLLKNIAFEDNTEGLNQNLELIGKEIAKKCKGVPLAIKTLGGLLRGQNEESEWEDVLIGDFWKLSEEQDSIMPILKLSYQNLLPEMRQCFAYCSLYPKDSKILRDELIQLWMAQGYLKCSTKKKHMEDVGNEFINIFLMNSFFQDPVKSRYGEITSFKMHDLMHDLAMLVAGNDYCFLDDKAENLEGRPMHVSLEFKAIHLLKSLDPSRLRTLILRDGNEGEFSVISSFKYLRILKMPYYSLLELSDSIENLKHLRYLQFFPEEGQISLFKSISNLICLQTLKLGRYDDEFVSQLVTKLVNLRCLDIDIVPLRSLRGMAVGLGKLSSLQFLSNFLVGESQNRKYGTLNELKDLNLRGELTINYLNRVRDATQESQDVNLKEKDLLQSLCLKWQDEDEIDYSDSSQLLKNLQPHHNLKQLNVLGYPGIVFPNWLSCLTNVVEIQLNWLLNCRCLPPLERLPSLKSLRLDGLHELEYIYLEDGFAVTFFPSLEILKLRGCPNLRGWKRLGDDIIDSHHHSLPPFPFISQLQISLCPKLTCMPTFPNVEDLYLHACGVEPLIATLNTTASTCSDDSSSYTAPLSMLKRLCFYHHPLNLPKRWMQNLTSLGFLKLGWSESEALEEFETCFNDNTNCLTSPRQIIIRLCKNLKTLPDWICNISSLEHIKISDCPNLASLPEGITRLTNLKIFEVRNCSLLLKECRTKTSVVSTQIAHIPEIILSGKVVNSLWWVPNMANTIRKGDEPVSGEGTVLQKLNLCNIGGLICWVEVSYSDQKSLGHLLQQHITIVAQQNWLAKLLGYQFEIIYKPGPENKAVDSLFRMFEDGELRQIASFSVWLQDQHISKEKESYPFLKQVEHDLLQDAHSRPGFSL* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0897 1204 Pfam NB-ARC domain 175 416 IPR002182 GO:0043531
Apr8g0897 1204 PANTHER DISEASE RESISTANCE PROTEIN RP 36 880 IPR044974 GO:0006952
Apr8g0897 1204 PRINTS Disease resistance protein signature 194 209 - -
Apr8g0897 1204 PRINTS Disease resistance protein signature 268 282 - -
Apr8g0897 1204 PRINTS Disease resistance protein signature 365 379 - -
Apr8g0897 1204 PRINTS Disease resistance protein signature 1014 1030 - -
Apr8g0897 1204 Gene3D Ribonuclease Inhibitor 516 670 IPR032675 -
Apr8g0897 1204 PANTHER OS05G0414200 PROTEIN 36 880 - -
Apr8g0897 1204 SUPERFAMILY L domain-like 493 888 - -
Apr8g0897 1204 Gene3D - 414 503 IPR036388 -
Apr8g0897 1204 Gene3D - 13 116 - -
Apr8g0897 1204 SUPERFAMILY L domain-like 904 1032 - -
Apr8g0897 1204 Pfam Rx N-terminal domain 14 93 IPR041118 -
Apr8g0897 1204 Coils Coil 38 58 - -
Apr8g0897 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 428 IPR027417 -
Apr8g0897 1204 Gene3D - 152 324 IPR027417 -
Apr8g0897 1204 Gene3D - 328 413 IPR042197 -
Apr8g0897 1204 Gene3D Ribonuclease Inhibitor 880 1047 IPR032675 -
Apr8g0897 1204 Gene3D Ribonuclease Inhibitor 677 879 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0897 Apr-Chr8 9855758 9862053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0897 191 452 WRKY Transcription Factor Family AT5G45050 25.843 9.60e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0897 - - aprc:113871448 2407.87