Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0860 ATGGCAAAGAGAAAGAGCTGGTTTGGATGGGTGAAAAGGCTATTCACTTCTGAGTCAAAGGACAAAAAGACAAAGAAATGGGAGTGGAGTTTTGGAAGGATTAAACAAAAACAATATCCAACAATTACAGCTCCAAATAGGACATTGGTTGAAGCAAATGCTGAGCAGAGAAAGCATGCTTTGACTGTGGCTATTGCAACAGCAGCTGCTGCTGAGGCTGCAGTTGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGCTCACTGGTGCTTCTCGTTCTTACTCATTTCTTTCCAAAGGAGATAGAAGCTTAGCTGCCATCAAGATCCAAAGCGCATACCGTGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAAGGAGTTATAAGATTGCAAGCCATAATTCGCGGTCAAGCTGTGAGGCGTCAAGTGTCTGTTTCTTTGAAAAATATTCACTACAGTGCAAGAAATCAGGTAGAAATTCAGGAAGGAAGCAGCAATGGCGTGGATGGAAACTACAAAAATGACCAGATCAAGAATTTTTCAAAGCAAAAGAAAAAGTTAGAAGAGAAGGAAATAAGGTCTGAATGTCATAGTCAAAGAAATTGGGATTGTAGCTTGCTCTCGAGAGAGGACATTGAAGCCATATGGTTAAGAAAGCAAGAGGCCATTGTCAAAAGAGAGCGCATGAAGCAGTACTCTTCTTCACAAAGGGAGAGAAAAAATCCTCAAATGGTGGAAGAATCTCTGCACAATAAGGACTTCGGAAGAGAGAGCTGCCGTACACTTGGAGAGTGGCTACATAAAGAAACATACAATTGGGATGTGCTTTACAAACAAACACTCCCTTCAAACTTGATCACAATGAAAAGAGAATTGCAAGAAGATGGATTGAGTTCACAAATTTCGATCCCGCGGAAATCATTTTCTCTAGTGAAAAGAACTTCAATTGGTGATGAGAGTTCGATGCCAAATTCTCCAGTTTTTCCTACTTTCATGGCTGTAACTGAATCCAGCAAAGCAAAGGTGAGATCTATGAGCACACCAAGGCAAAGAACAGCATTTATGGATAATCAAAATGAGCCTCACAAGGAGAGCATTTCCTTGTGCTCTTATTATGGTGCTACTACTAGCACCAATGAAAGATGCCAAAGTGCAAATAGCCTTTATTATCATTAG 1179 0.4105 MAKRKSWFGWVKRLFTSESKDKKTKKWEWSFGRIKQKQYPTITAPNRTLVEANAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGASRSYSFLSKGDRSLAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGQAVRRQVSVSLKNIHYSARNQVEIQEGSSNGVDGNYKNDQIKNFSKQKKKLEEKEIRSECHSQRNWDCSLLSREDIEAIWLRKQEAIVKRERMKQYSSSQRERKNPQMVEESLHNKDFGRESCRTLGEWLHKETYNWDVLYKQTLPSNLITMKRELQEDGLSSQISIPRKSFSLVKRTSIGDESSMPNSPVFPTFMAVTESSKAKVRSMSTPRQRTAFMDNQNEPHKESISLCSYYGATTSTNERCQSANSLYYH* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0860 392 ProSiteProfiles IQ motif profile. 126 152 IPR000048 GO:0005515
Apr8g0860 392 PANTHER IQ-DOMAIN 12 1 381 - -
Apr8g0860 392 Pfam Protein of unknown function (DUF4005) 319 379 IPR025064 -
Apr8g0860 392 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Apr8g0860 392 PANTHER IQ-DOMAIN 5-RELATED 1 381 - -
Apr8g0860 392 Gene3D - 101 150 - -
Apr8g0860 392 SMART iq_5 101 123 IPR000048 GO:0005515
Apr8g0860 392 Pfam IQ calmodulin-binding motif 105 123 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0860 1 392 IQD Protein Family AT5G03960 45.192 7.33e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0860 - - gmx:100800767 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0860 8 9055597 9058572 Apr8g0860 8 9055597 9058572 ECH