Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0853 ATGGTGAAACCTACCAAGGCAGAGAAGAAGATCGCCTACGATTCCAAGCTGTGCCAACTCCTCGATGACTACACTCAGATCCTGGTTCGCTCTGTTCGCATGCACGCAGAGAAAACCGGCAACGATGTCTATCTCAGCCTTATCCCCCTCCTTGTCGGCAATGTTGGATTGATTTTCACAAAGGGTGACTTGAAAGAGGTTAGCGAGGAGGTTGCTAAGTATAAGGTGGGAGCACCAGCTCGTGTTGGTTTGGTCGCTCCGATTGACGTTGTTGTTCCTCCAGGAAACACAGGACTCGATCCCTCTCAGACCTCTTTCTTCCAGGTGCTTAATATTCCCACCAAGATTAACAAGGGTACTGTGGAAATCATTACGCCTGTCGAACTTATTAAGAAGGGAGACAAAGTGGGGTCTTCTGAAGCTGCCTTGCTTGCCAAGCTTGGCATAAGGCCCTTCTCATATGGGCTTGTGGTTCTTTCGGTCTATGATAATGGTTCGGTCTTCAGTCCTGAAGTTCTTGATCTTACCGAGGATGACCTAATTGAGAAGTTTGCTGTTGGTGTCTCGATGGTTACTTCTCTCTCGTTGGCCGTCTCCTACCCAACACTTGCAGCTGCACCGCATATGTTTGTTAACGCGTACAAAAATGTCCTTGCTGTTGCAGTTGAGACAGATTACTCTTTCCCTGAGGCAGACAAGGTCAAGGAGTACCTCAAGGATCCAAGTAAATTTGCTGTGGCTGCTGTTGCTGTTCCTGCTGCTGATTCTGGTGCTGGACCAGCTGCTGCCAAGGAAGAGGAGAAGAAGGAAGAGCCGGCTGAGGAGTCTGACGATGACATGGGTTTCAGTCTTTTTGACTAA 861 0.4866 MVKPTKAEKKIAYDSKLCQLLDDYTQILVRSVRMHAEKTGNDVYLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIEKFAVGVSMVTSLSLAVSYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAVPAADSGAGPAAAKEEEKKEEPAEESDDDMGFSLFD* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0853 286 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 29 286 - -
Apr8g0853 286 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 2 29 - -
Apr8g0853 286 Pfam Insertion domain in 60S ribosomal protein L10P 80 149 IPR040637 -
Apr8g0853 286 MobiDBLite consensus disorder prediction 271 286 - -
Apr8g0853 286 MobiDBLite consensus disorder prediction 254 286 - -
Apr8g0853 286 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 2 29 - -
Apr8g0853 286 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 29 286 - -
Apr8g0853 286 Gene3D - 27 175 IPR043141 -
Apr8g0853 286 PIRSF L10E 30 286 IPR030670 GO:0042254
Apr8g0853 286 PIRSF L10E 1 35 IPR030670 GO:0042254
Apr8g0853 286 Pfam 60s Acidic ribosomal protein 200 285 - -
Apr8g0853 286 Gene3D - 80 151 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0853 Apr-Chr8 8971324 8973148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0853 1 244 Cytoplasmic Ribosomal Protein Gene Family AT3G09200 88.115 1.57e-158 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0853 K02941 - gmx:100777482 471.855