Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0841 ATGGCTTCCTCTTCTTCCGATCCTGGCAAGTCCGAAGCTGGTGGCGGAACGGAGACATCCGAAGCAGCGATGCCGAACGATGAACAATTACGATTGAAGAAAGCGAAGAAAGAGAGAGTGTGCACTGCGAAAGAGCGAATCAGCAAAATGCCTCCTTGTGTTGCGGGCAAACGCAGCTCCATATACCGTGGCGTCACCAGGCATAGATGGACTGGTCGTTATGAAGCACATCTCTGGGATAAAAGTACATGGAACCAGAATCAGAATAAGAAAGGAAAACAAGTTTACTTGGGGGCATATGATGATGAAGAAGCAGCAGCTAGAGCATATGATCTTGCTGCTCTGAAATATTGGGGTCCAAGTGCTCTCATAAATTTTCCAGTGACTGATTATGCAAGAGATCTTGAAGAAATGCAGAATGTTTCAAGAGAGGAATACCTAGCATCTTTACGGCGGTATGCTTTGTGCAGGAAGAGCAGTGGATTTTCAAGAGGACTATCCAAATACCGGGGACTCTCCAGTCGATGGGAGCCAAAATATGGTCGTATGGCAGGATTTGACTACGTCAATAGTATATATTGTGGTAATGCAGGTGAAGATTCAGCAGCAGAAACAAAATATATTAGTAGTTTCTGCATAGAAAGAAAGATTGATTTAACAAGTTACATCAAATGGTGGGCGTCCTATAAGAGTCGACAACCGGATAGTGCAGCAAGATTTTCAGACGTTAAAAAGCATGGTTTTGCTGGAGATATTTGCTGTGAGCTCAAAACATTGGAACAAAAATTCCACACGTCAGAACCATACCAGTTGCCAGAGTTAGGCATGCCCTGTAAAGGAAGAAAACAAAAACATTCTTCAGTATCTTCTTTAAGTATCTTGTCACAATCAGCTGCTTACAAGAATTTGCAAGAGAAAGCAGCGAAGAGACAGGACAGAAGCAAAGATAATGATGAGAATGAAAATAAACATACCATAAACAAGTTGGACCATGGCAGGGCAGCTGAGAAATCGTCAAACAATGATGGTGGCAATGAAACACTTGAAATTGCAATGGGAATGAGTGGATCACTGCCTCTTCAAAGAAATGTTTATCCATTGACACAGTTACTGTCCGCTCCACTTTTGACAGCCTACAGTACTGTTGATCCCTTGGTAGATCCTGTTCTCTGGACGCCTCTTGTTCCTATACTTCCTGCTGGCCTTTCCCCTGTAGCCGAGGTTACAAAGACTGAGAGCAGTTCAACGTACACCATTTTCAGCCAGAGGAGTGATTAG 1278 0.4335 MASSSSDPGKSEAGGGTETSEAAMPNDEQLRLKKAKKERVCTAKERISKMPPCVAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPSALINFPVTDYARDLEEMQNVSREEYLASLRRYALCRKSSGFSRGLSKYRGLSSRWEPKYGRMAGFDYVNSIYCGNAGEDSAAETKYISSFCIERKIDLTSYIKWWASYKSRQPDSAARFSDVKKHGFAGDICCELKTLEQKFHTSEPYQLPELGMPCKGRKQKHSSVSSLSILSQSAAYKNLQEKAAKRQDRSKDNDENENKHTINKLDHGRAAEKSSNNDGGNETLEIAMGMSGSLPLQRNVYPLTQLLSAPLLTAYSTVDPLVDPVLWTPLVPILPAGLSPVAEVTKTESSSTYTIFSQRSD* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0841 425 MobiDBLite consensus disorder prediction 1 35 - -
Apr8g0841 425 SUPERFAMILY DNA-binding domain 60 128 IPR016177 GO:0003677
Apr8g0841 425 CDD AP2 60 129 IPR001471 GO:0003700|GO:0006355
Apr8g0841 425 SMART rav1_2 61 133 IPR001471 GO:0003700|GO:0006355
Apr8g0841 425 MobiDBLite consensus disorder prediction 305 337 - -
Apr8g0841 425 ProSiteProfiles AP2/ERF domain profile. 61 127 IPR001471 GO:0003700|GO:0006355
Apr8g0841 425 MobiDBLite consensus disorder prediction 304 348 - -
Apr8g0841 425 PANTHER BNAA03G19580D PROTEIN 2 419 - -
Apr8g0841 425 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 419 - -
Apr8g0841 425 Pfam AP2 domain 61 119 IPR001471 GO:0003700|GO:0006355
Apr8g0841 425 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Apr8g0841 425 PRINTS Ethylene responsive element binding protein signature 109 129 IPR001471 GO:0003700|GO:0006355
Apr8g0841 425 Gene3D AP2/ERF domain 61 129 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0841 Apr-Chr8 8810844 8816017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0841 32 408 AP2-EREBP Transcription Factor Family AT2G41710 60.938 2.48e-147 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr8g0841 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0841 K09285 - gmx:100795084 655.595