Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0824 ATGGAGAAGATGACACTCACCATTAACGCTTCTCTCTTCTCCACAAATACCATTCTTCCAAAAACTTCTCTTCAACCCTTCTTCTCTAATCAACTACTTGGCCTTCCCTTATCTTCTTCTTTAGCCGCCACCAAACCTCGCCTTCAATTTTTCTCTTACCGTAACAACACTACTTGCAGGCCCATTAAGTGTTCTGTTTCTCAAGCCACAGACCCTAAAACTGAGAAGAAGAGGCAATTGCTGAGGAGAGGGGACGTGAGAAACATAGCAATTGTTGCTCACGTTGACCATGGAAAAACTACTCTTGTAGATGCCATGCTGAAACAAACTAAGGTATTTCGTGATAATCAGTTTGTGCAGGAAAGGATAATGGACTCGAATGATTTGGAGCGTGAAAGAGGAATCACAATACTGAGTAAAAATACATCTGTTACTTATAAAGACACAAAGATTAATATAATAGATACCCCTGGTCACTCAGATTTTGGGGGTGAAGTAGAGCGCATCTTAAATATGGTGGAAGGAATCCTTCTAGTGGTAGATTCTGTTGAAGGGCCAATGCCACAGACAAGATTTGTCTTAAAGAAGGCTTTAGAGTTTGGCCATTCAGTTGTCGTGGTTGTGAATAAAATAGATAGGCCTTCTGCTCGCCCAGATTATGTTGTCAACTCTACTTTTGAGCTCTTCATTGAACTAAATGCAACAGATGAACAGTGTGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGGCAAGCAGGGTTGTCTCCTGAAAATCTGGCAGAAGACCTTGGACCGTTGTTTGAATCCATCACTAGATGCATCCCTGGACCACGTATTGACAAAGATGGTGCACTTCAAATGCTTGTTACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGGCGCTTGCAAGCTGGGGTTTTAGAAAAAGGCATGGATGTACGGGTATGTACATCAGAAGATTCGTGTAGATTTGGAAGAATTAGTGAGCTTTATGTGTATAATAAATTCAGTAGGGTACCTGCAGATAGTGTGGAGGCTGGTGATATATGTGCAGTATGTGGAATTACTGATATTCAGATTGGGGAGACAATTGCTGATAAAGTTTCTGGTAAGCCACTTCCTTCCATCAAGGTTGAAGAACCTACAGTGAAGATGTCATTCTCCATAAACACTTCACCTTTTGTTGGCCGTGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGACAGGCTTGATCGTGAACTTGAGCGAAATCTGGCTATGAGAGTTGAAGATGGTGAAACAGCAGATACATTCATTGTCAGTGGGCGTGGAACCTTGCACATCACCATACTCATAGAAAATATGCGAAGAGAAGGATACGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAAGTGAATGAAGAATTGTTGGAACCTTATGAGATTGCAACTGTGGAGGTGCCAGAAGAACACATGGGAGCTGTTGTTGAACTGCTTGGTAAAAGACGAGGGCAAATGTTTGATATGCAAGGAGCTGGATCGGAGGGAACTACACTACTCAAATATAAAATCCCAACTCGTGGCCTTCTTGGATTGCGGAATGCAATTTTAACTGCTTCCCGAGGGACAGCTATTCTCAATACTGTCTTTGATAGCTATGGGCCTTGGGCTGGTGACATTAGTACTCGGGATCAAGGCTCACTGGTTGCTTTTGAGGATGGAACAAGCACTTCTTATGCAATCTCTAGTTCACAAGAGAGGGGACAGATGTTTATTGGTCCTGGAGTGGAAGTTTATAAAGGTCAAATTGTTGGCATCCATCAGAGACCCGGGGACTTGGCCTTGAATGTTTGCAAGAAAAAAGCTGCGACCAACATACGTTCCAACAAGGAACAGACAGTGATTCTTGATACACCACTGGACTACAGCTTGGATGACTGCATTGAATACATCCAAGAAGATGAACTTGTGGAGGTCACCCCTCAAAGTATCCGAATGTGCAAAAATCCAAAGCTTGCAAATACAAAGAAAACAAGGTAG 2043 0.4205 MEKMTLTINASLFSTNTILPKTSLQPFFSNQLLGLPLSSSLAATKPRLQFFSYRNNTTCRPIKCSVSQATDPKTEKKRQLLRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDYVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESITRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRLQAGVLEKGMDVRVCTSEDSCRFGRISELYVYNKFSRVPADSVEAGDICAVCGITDIQIGETIADKVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLDRELERNLAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNEELLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGAGSEGTTLLKYKIPTRGLLGLRNAILTASRGTAILNTVFDSYGPWAGDISTRDQGSLVAFEDGTSTSYAISSSQERGQMFIGPGVEVYKGQIVGIHQRPGDLALNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLANTKKTR* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0824 680 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 84 279 IPR000795 GO:0003924|GO:0005525
Apr8g0824 680 CDD BipA_TypA_II 286 379 - -
Apr8g0824 680 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 86 678 IPR006298 GO:0005525
Apr8g0824 680 SMART EFG_C_a 476 565 IPR000640 -
Apr8g0824 680 PRINTS GTP-binding elongation factor signature 88 101 IPR000795 GO:0003924|GO:0005525
Apr8g0824 680 PRINTS GTP-binding elongation factor signature 132 140 IPR000795 GO:0003924|GO:0005525
Apr8g0824 680 PRINTS GTP-binding elongation factor signature 152 162 IPR000795 GO:0003924|GO:0005525
Apr8g0824 680 PRINTS GTP-binding elongation factor signature 204 213 IPR000795 GO:0003924|GO:0005525
Apr8g0824 680 Gene3D bipa protein 564 671 IPR042116 -
Apr8g0824 680 SUPERFAMILY Translation proteins 232 379 IPR009000 -
Apr8g0824 680 Gene3D - 470 563 - -
Apr8g0824 680 TIGRFAM small_GTP: small GTP-binding protein domain 87 224 IPR005225 GO:0005525
Apr8g0824 680 Gene3D - 84 279 IPR027417 -
Apr8g0824 680 SUPERFAMILY EF-G C-terminal domain-like 384 468 IPR035647 -
Apr8g0824 680 CDD TypA_BipA 85 278 - -
Apr8g0824 680 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 62 675 - -
Apr8g0824 680 Pfam Elongation factor G C-terminus 476 562 IPR000640 -
Apr8g0824 680 Gene3D Translation factors 280 380 - -
Apr8g0824 680 CDD BipA_TypA_C 479 558 IPR035651 -
Apr8g0824 680 Pfam Elongation factor Tu GTP binding domain 86 276 IPR000795 GO:0003924|GO:0005525
Apr8g0824 680 Gene3D Elongation Factor G (Translational Gtpase), domain 3 387 670 - -
Apr8g0824 680 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 125 140 IPR031157 -
Apr8g0824 680 SUPERFAMILY EF-G C-terminal domain-like 479 594 IPR035647 -
Apr8g0824 680 Pfam Elongation factor Tu domain 2 300 369 IPR004161 GO:0005525
Apr8g0824 680 PANTHER BNAC09G43450D PROTEIN 62 675 - -
Apr8g0824 680 CDD BipA_III 386 464 - -
Apr8g0824 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 286 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0824 Apr-Chr8 8593932 8601031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0824 86 213 Eukaryotic Initiation Factors Gene Family AT3G22980 44.615 4.50e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0824 K06207 - gmx:100785222 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0824 8 8593932 8601031 Apr8g0824 8 8593932 8601031 ECH