Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0819 ATGGCTGAATCAGTCCTCTTCAGCGTGGCAGAGTCCCTCATTGGGAAGCTTGCTTCACTTGCTGTGAAAGAAGCTACTCTGGCAATGGGTGTGTATGATGATCTACAAAAGATGAAAGACACTATCTCATTCATCAACGCCGTGCTGTTGGATGCAGAGCAAAAGCAGCACCAGAACAACCAGTTGCGTGTATGGCTCACGCAGATCAAGCACGTGCTCTCTGACACCGAAGACATTATCGATGACTTTGAGTGTGAAGCGTTGCGAAAGCATGTTGTTAAGACTCACGGCAGCATGTCCAGGAAGGTACGCCGTTTCTTCTCAGGTTCTAATCCTCTCATATATCGTCTTAAAATGGCACATGAGATTAAAGAAATCAATAAGAGATTAGATAAGATTGCAAATGATCGAAACAATCATGGCCTTCAAACCAATGATGTCGATAGGCGTGCCGTGCATACGAGGGAGACCGTGGATCCGAGGGAGACCTATTCCTTCGTAGATGCTTCTGATGTGAATGTGATGATAGGAAGGGAACAGGATAAGGAAAAGATCATTGGACTTTTGTTGGAAGACGATGATGGTGGAAGTCTCTCTGTTATTTCCATTGTGGGAATTGGAGGCTTGGGAAAGACCACGCTTGCAAAGACAGTTTTCAATCATAAAAGGATTGGTGACTCTTTCGACTTGAAGTTGTGGGTGTATGTATCCAATGATTTTGAACTCATGAACGTGCTTATCAAGATCCTCAACTCTAATCCAAACATGAATAAAGAGAACTACAAGGACCTTGGGATGGAGCAGCTAACAAACAAGGTGATAAATATGCTTCGTGGTAAGAAGTTCTTGCTTGTCTTGGATGACGTGTGGAACGAGAATCATGATAAATGGGTTGAGTTGAAGGGTTTAATACAAATAGGTGCCAAAGGAAGTAAAGTCCTGGTGACTACTCGTAGCCGTTCCATTGCTGCCATGATGAACCCTAAACCCTCATACTCCCACCCTTTGGACCGTCTTTCTGAAGTAGATTCCGTGACTCTGTTCATCAACTGCGCTTTTGAAGAAGGAGAACAGAAGAAGTATCCAGAGTTGTTGTTGATCGGGGAAGATATTGCAAAAAAATGCAAAGGGATTCCTTTGGCAGTGAGAACTTTGGGGAGTTCACTGTTCTCAAAAGTTGATACAGAAGAGTGGAAGTCTGTTAAAGAAAGCGAGATTTGGAATTTACCACAAAATGATGGTGACATTTTGCCGGCTCTAAAATTAAGCTATGATCAGTTACCTTCCTATTTAAAACGATGTTTCGCTTGCTTCTCCCTTCTTGAAAAGGTGTTTACTATGAGTAGTCATCCCATTTCTTCGCTCTGGGGGGCACTTGGTTTCCTTCCATCGTCAATGCAAAATAAAACATTCGAAGACGGTGGCAAACAAATTTTGCATGAGCTGCACTCGAGGTGTTTTCTTCAAGATTTTGTTGATTTTAGTAGTACTTGCACGTTCAAATTACATGATTTGGTGCATGATCTTGCAGTATATGTATCAAAAGATGAGTTTCAACACGTGAAATCCCGCAGTGAAAATATATCTGAAAATACCCAACATTTGTCATTTGCTGAAGACAATTTGCTTGGTCAAGCTTCCTTTCCTACAGGTCTAAGATCCATTATTTTTCCTCGTGGAGCCAACAACGAAGCTTCCTTGAATTCATTGTTGTCCAGTTGCAAATACTTGCGGTATTTGGAATTAGGTTATTCTGAATACAAGAGTTTGCCTAGCTCCATTGGTAAGTTGAAACATTTAACATTTCTCGGTCTTGGAAGTAATATTTCAAGACTCCCAGACTCGGTGTGCAAACTCCAAAATTTGCAAGTTTTAAGACTCCGTGATTGCGAAAACCTAGAAACATTGCCCAAAGGCATAGAGAACTTGATCAGCCTTCGACAGTTGCATTTAACCTCTAAGCAATCCAGTTTTCCAGACAAAGAGATTGCAAAATTGACTGCTTTAGAAACTTTATCCTTGATTTCTTGTGACAACCTGACGTCATTACTTGGAGGGATCCAACTTCCTAGTCTTAAATCTTTAATTATTAAGTCTTGTGAGAGTCTAAAGTCTTTGCCATTTCATGTCATTCCAAACTTGGAGAGTTTGTTTATTATCAGCTGTCATAAGTTGGAATTGTCAAAAGAAATTAACGATAAAATTCCCAGTTTAAAATTAAAGTTACTTTTTCTTGGTGATTTACCGCAACTGGTCACTTTGCCTCAATGGTTGCGAGGATCATCAAACACATTGCAATCCTTGGGAACTATGGAATGTGTCAATCTTGAGGAGCTTCCTGAGTGGTTTTCGACTTTCGTTTGTCTCAAAACACTTTTAATCGAAAGTTGCCCAAAATTGATTTCACTCTCTGATAACATGCATCACCTCACAAAGCTTGAATATTTAGAAATTAGTGATTGTCCTGAATTATATAAACGATACCAACCGAATGTCGGGGAGGACTGGCACAAAATATCACACATCAAACGAGTTATCGTTCCTGTGCCAGAAGAGGAAGATTAA 2565 0.4055 MAESVLFSVAESLIGKLASLAVKEATLAMGVYDDLQKMKDTISFINAVLLDAEQKQHQNNQLRVWLTQIKHVLSDTEDIIDDFECEALRKHVVKTHGSMSRKVRRFFSGSNPLIYRLKMAHEIKEINKRLDKIANDRNNHGLQTNDVDRRAVHTRETVDPRETYSFVDASDVNVMIGREQDKEKIIGLLLEDDDGGSLSVISIVGIGGLGKTTLAKTVFNHKRIGDSFDLKLWVYVSNDFELMNVLIKILNSNPNMNKENYKDLGMEQLTNKVINMLRGKKFLLVLDDVWNENHDKWVELKGLIQIGAKGSKVLVTTRSRSIAAMMNPKPSYSHPLDRLSEVDSVTLFINCAFEEGEQKKYPELLLIGEDIAKKCKGIPLAVRTLGSSLFSKVDTEEWKSVKESEIWNLPQNDGDILPALKLSYDQLPSYLKRCFACFSLLEKVFTMSSHPISSLWGALGFLPSSMQNKTFEDGGKQILHELHSRCFLQDFVDFSSTCTFKLHDLVHDLAVYVSKDEFQHVKSRSENISENTQHLSFAEDNLLGQASFPTGLRSIIFPRGANNEASLNSLLSSCKYLRYLELGYSEYKSLPSSIGKLKHLTFLGLGSNISRLPDSVCKLQNLQVLRLRDCENLETLPKGIENLISLRQLHLTSKQSSFPDKEIAKLTALETLSLISCDNLTSLLGGIQLPSLKSLIIKSCESLKSLPFHVIPNLESLFIISCHKLELSKEINDKIPSLKLKLLFLGDLPQLVTLPQWLRGSSNTLQSLGTMECVNLEELPEWFSTFVCLKTLLIESCPKLISLSDNMHHLTKLEYLEISDCPELYKRYQPNVGEDWHKISHIKRVIVPVPEEED* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0819 854 Pfam NB-ARC domain 178 425 IPR002182 GO:0043531
Apr8g0819 854 Pfam Rx N-terminal domain 10 98 IPR041118 -
Apr8g0819 854 Gene3D - 338 428 IPR042197 -
Apr8g0819 854 PRINTS Disease resistance protein signature 200 215 - -
Apr8g0819 854 PRINTS Disease resistance protein signature 276 290 - -
Apr8g0819 854 PRINTS Disease resistance protein signature 375 389 - -
Apr8g0819 854 PRINTS Disease resistance protein signature 808 824 - -
Apr8g0819 854 PANTHER OS08G0543100 PROTEIN 24 828 - -
Apr8g0819 854 Gene3D - 163 331 IPR027417 -
Apr8g0819 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 437 IPR027417 -
Apr8g0819 854 CDD RX-CC_like 8 135 IPR038005 -
Apr8g0819 854 PANTHER DISEASE RESISTANCE PROTEIN RP 24 828 IPR044974 GO:0006952
Apr8g0819 854 Gene3D Ribonuclease Inhibitor 483 684 IPR032675 -
Apr8g0819 854 Gene3D Ribonuclease Inhibitor 688 832 IPR032675 -
Apr8g0819 854 Gene3D - 10 124 - -
Apr8g0819 854 SUPERFAMILY L domain-like 501 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0819 Apr-Chr8 8512595 8516001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0819 198 824 WRKY Transcription Factor Family AT5G45050 24.441 6.77e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0819 - - gmx:100780033 1003.43