Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0813 ATGGCTGAATCAGTACTCTTCAGCGTGGCAGAGTCGCTCATAGGGAAGCTTGCTTCCCGTGCCATGGAAGAAGCTTCTCTGGCTATGGGTGTGTATGATGATCTACGCGAGATGAAACAGACTATCTCGTTCATCAAAGCCGTGCTGTTGGATGCAGAGCAAAAGCAGCACCAGAACAACCAGTTGCGTGAATGGCTCACGCAGATCAAGCACGTGCTCTATAACGCCGAAGACATCGTCGATGACTTTGAGTGTGAAGCGTTGCGAAAGCATGTTGTTAAAACTCAGGGCAGCCTGTCCAGGAAGGTACGCCGTTTCTTCTCATGTTCTAATCCTATCATATATCGTCTTAAAATGGCACATGAGATTAAAGAAATCAATAAGAGATTAAACAAGATTGCAACTGATAGAAACAATTATGGCCTTCAAACCAATGATGTTGATACGCGTGTCGTGCATAGGAGGGAATTGACCCATTCCCACGTAAATGCTTCTGATGTGATAGGAAGGGAACAGGATAAGAAAAACATCATTGAACTTTTGTTGCAAGACGATGATGGTGGAAGTCTCTCTGTTATTTCCATTGCGGGAATTGGAGGCTTGGGAAAGACCACACTTGCGAAGACTGTTTTCAATGATAACATTATTGATGAGTCTTTCGAGTTGAAGATGTGGGTGTGCGTGTCTGATGAATTTGAACCCAAGAAAATGCTTATTAAGATCCTCAACTCTGCTGCAAACCTGAATCAAGAGAACTATAAGGACCTCGAGATGGAGCAGCTAAAAAATCATGTGAGAAATATGCTTGATGGTAAAAAGTTCTTGCTTGTCTTGGATGACGTGTGGAATGAGGATCGTGTTAAATGGGTTGAGTTCAAGAGTTTAATACAAATAGGTGCCAAAGGAAGTAAAGTCCTAGTGACTACTCGTAGCCATGACATTGCTGCCATGGTGGGCACTAAACCCTCGTACTCCTACCCATTAAAAGGTCTTTCTGAAGTGGATTCCATGACTCTGTTCATCAAATGGGCTTTCCAAGAAGGAGAAGAGAAGAAGTATCCAGAATTGTTGTTGATTGGGAAAGAAATTGCAAAGAAATGCCGAGGGCTTCCGTTGGCAGTGAGAACTTTGGGATGTTCACTGTTCTCAAAAGTTGATGCAGAAGAGTGGAAGTTTGTTAGAGACAATGAGATTTGGAGTTTACCTCAAAATAATGGTGACATTTTGCCGGCACTCAAATTAAGCTATGATCGATTACCTTCTTATTTAAAACGATGTTTTTCTTGCTTCTCCTTTTTTGATAAGGATGTTATTTTTAGTAGTTTTGATGTTTCTGCCCTTTGGGAGGCACTTGGTTTCCTTCCATCATCAATGCAAAATAAAACATTGGAAGACGGTTGCACTCATATTTTGCATGAGCTGCGCTCGAGATCTTTTCTTCAAGATTTTGTTGACCATGGTACTACTTGCAAGTTCATGTTACATGATTTGGTGCATGATCTTGCACTATATGTCTCAAAAGATGAGTTTCAGCGCGTGAATTCCCGCACTCAAAATATATCTGAAAGTACCCAACATTTGTCATTTGCTGAAGACAGTTTGCTTGGCCAAGCTTCCTTTCCTATAGGTCTAAGAACCATTATTTTTCCTCATAGAGCCAACAATGAAGCTTCCTTGAATTCATTGTTGTCCAGGTGCAAATACTTGCGGTTTCTGAATATAAGTTCTTCTGCATACAAGAGTTTGCCTAGCTCCATTGGTAAGTTGAAACATTTAAGATGTCTCATTCTTCAACATAATACAGAACTTTCAAGACTCCCAGATTCAGTGTGCAAACTCCAAAATTTGCAAGTTTTACGACTCCATCATTGCAAAAACCTAGAAGCGTTGCCCAAAGGCATAGAAAACTTGATCAACCTTCGGCAGCTGTATTTAACCTTTAAGCAATCTAGTTTTCCTGAGATTGCAAAATGGACTTCTTTAGAAACTTTATACTTGGATTCTTGCGACAACCTGAAGTCATTATTTGAAGGGATACAACTTCCTAGTCTTAAATGTTTTATTATTTTATCTTGTGGGAGTCTAAAGTCTTTGCCATTTCATGCCATTCCAAACTTGGAGAGTTTGGTTATTTTCGGCTGTCCTAAGTTGGAATTGTCAAAAGAACTTGACGAAAATATTCCCAGTTTGAAATTAAAGTTTCTTGGTCTTTGTGCTTTACCGCAACTGGTCACTTTGCCTCACTGGTTGCGAGGATCTTCAAACACATTGCAATCCTTGGTAACTATCAAATGTGTCAATCTTGAGGAGCTTCCTGAGTGGTTTTCGACTTTGATTTGTCTCAAAACACTTTCATTTAGTGATTGCCCAAAATTGATTTCACTCTCTGATAACATGCATCACCTGATAAAGCTTGAATATTTAGAAATTGAATATTGTCCTGAATTATATAAAAGATGCCAACCGAATGTCGGAGAGGATTGGCACAAAATATCACATGTCAAACAAGTTATCCTTCGTCAACGTGAAGAGGAAGAGTAA 2541 0.3991 MAESVLFSVAESLIGKLASRAMEEASLAMGVYDDLREMKQTISFIKAVLLDAEQKQHQNNQLREWLTQIKHVLYNAEDIVDDFECEALRKHVVKTQGSLSRKVRRFFSCSNPIIYRLKMAHEIKEINKRLNKIATDRNNYGLQTNDVDTRVVHRRELTHSHVNASDVIGREQDKKNIIELLLQDDDGGSLSVISIAGIGGLGKTTLAKTVFNDNIIDESFELKMWVCVSDEFEPKKMLIKILNSAANLNQENYKDLEMEQLKNHVRNMLDGKKFLLVLDDVWNEDRVKWVEFKSLIQIGAKGSKVLVTTRSHDIAAMVGTKPSYSYPLKGLSEVDSMTLFIKWAFQEGEEKKYPELLLIGKEIAKKCRGLPLAVRTLGCSLFSKVDAEEWKFVRDNEIWSLPQNNGDILPALKLSYDRLPSYLKRCFSCFSFFDKDVIFSSFDVSALWEALGFLPSSMQNKTLEDGCTHILHELRSRSFLQDFVDHGTTCKFMLHDLVHDLALYVSKDEFQRVNSRTQNISESTQHLSFAEDSLLGQASFPIGLRTIIFPHRANNEASLNSLLSRCKYLRFLNISSSAYKSLPSSIGKLKHLRCLILQHNTELSRLPDSVCKLQNLQVLRLHHCKNLEALPKGIENLINLRQLYLTFKQSSFPEIAKWTSLETLYLDSCDNLKSLFEGIQLPSLKCFIILSCGSLKSLPFHAIPNLESLVIFGCPKLELSKELDENIPSLKLKFLGLCALPQLVTLPHWLRGSSNTLQSLVTIKCVNLEELPEWFSTLICLKTLSFSDCPKLISLSDNMHHLIKLEYLEIEYCPELYKRCQPNVGEDWHKISHVKQVILRQREEEE* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0813 846 Pfam Rx N-terminal domain 10 98 IPR041118 -
Apr8g0813 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 429 IPR027417 -
Apr8g0813 846 CDD RX-CC_like 8 134 IPR038005 -
Apr8g0813 846 Coils Coil 239 259 - -
Apr8g0813 846 PANTHER OS08G0543100 PROTEIN 27 822 - -
Apr8g0813 846 Coils Coil 35 55 - -
Apr8g0813 846 Gene3D - 148 322 IPR027417 -
Apr8g0813 846 Pfam NB-ARC domain 170 417 IPR002182 GO:0043531
Apr8g0813 846 Gene3D - 410 504 IPR036388 -
Apr8g0813 846 Gene3D Ribonuclease Inhibitor 544 840 IPR032675 -
Apr8g0813 846 PANTHER DISEASE RESISTANCE PROTEIN RP 27 822 IPR044974 GO:0006952
Apr8g0813 846 Gene3D - 10 124 - -
Apr8g0813 846 PRINTS Disease resistance protein signature 192 207 - -
Apr8g0813 846 PRINTS Disease resistance protein signature 268 282 - -
Apr8g0813 846 PRINTS Disease resistance protein signature 367 381 - -
Apr8g0813 846 PRINTS Disease resistance protein signature 611 627 - -
Apr8g0813 846 SUPERFAMILY L domain-like 491 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0813 Apr-Chr8 8380760 8386880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0813 193 743 WRKY Transcription Factor Family AT5G45050 23.817 4.67e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0813 - - gmx:100780033 1059.67