Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0809 ATGGAAGGTTGCAAAAAGTCCCCACTAAAGCCTTGGAAGAAAGGGCCAACAAGGGGTAAAGGTGGCCCCCAAAATGCTTCATGTGAGTATAGAGGTGTTAGACAAAGAACATGGGGTAAATGGGTTGCTGAAATAAGAGAGCCAAAGAAGAGAACAAGACTCTGGCTTGGCTCTTTTGCCACAGCAGAAGAAGCTGCTTTGGCTTATGACGAGGCTGCAAGGAGACTCTACGGACCTGATGCTTATCTTAACCTTCCCCACATGCAACCAAGCTTCATTAGTTCCAATACCAAACCTCAAAAGTTCAAATGGTTCCCTTCCAAAAACTTCATTTCCATGTTCCCTTCACGTGGATTACTCAACCTCAATGCACAACCAAGTGTCCATGTAATCCATCAAAGGCTCCAACAACTTAAGCACAAGAATGGGGTGGTTGCAAATGCAAATCAATCACCACTTCCGAGTTCATCATCCACTGATCCAAAGGTAGAACTTGAGAACATGGGCACCAAAAATCATGCAGAAAATTTTCCTCTACCTGAAAAATATGCTCAAACTTCATCACCAAAGATGCTTGGAGATTTTCATGAGAAACCCCAGATAGACCTTCTTGAGTTTCTTCAACAGATGGGAATCCTAAAAGATGAAAGAGAGTCAGAGAAAACTGATAGCTCAGGAAGTTCAACAGTGTCTGAAGCTGCATCAAGAGATGATAATGAGAAACAAAAAGTGTTTTCTGACATGAGTATTAACTGGGATGCATTGATTGAGATGCATCAGCATGACTATGGAGTTGCAGATAATTATCATGAATCAGAAGCAATCCAGTTCGAAGCATATGATATAAACGAAGAACTTACTTTCTCCACTTCCATTTGGAACTACTAA 888 0.4144 MEGCKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAALAYDEAARRLYGPDAYLNLPHMQPSFISSNTKPQKFKWFPSKNFISMFPSRGLLNLNAQPSVHVIHQRLQQLKHKNGVVANANQSPLPSSSSTDPKVELENMGTKNHAENFPLPEKYAQTSSPKMLGDFHEKPQIDLLEFLQQMGILKDERESEKTDSSGSSTVSEAASRDDNEKQKVFSDMSINWDALIEMHQHDYGVADNYHESEAIQFEAYDINEELTFSTSIWNY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0809 295 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Apr8g0809 295 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Apr8g0809 295 MobiDBLite consensus disorder prediction 215 242 - -
Apr8g0809 295 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Apr8g0809 295 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Apr8g0809 295 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 1 292 - -
Apr8g0809 295 MobiDBLite consensus disorder prediction 1 27 - -
Apr8g0809 295 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Apr8g0809 295 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 292 - -
Apr8g0809 295 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Apr8g0809 295 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Apr8g0809 295 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0809 Apr-Chr8 8322208 8323095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0809 5 295 AP2-EREBP Transcription Factor Family AT3G57600 50.508 6.67e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr8g0809 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0809 - - gmx:100808363 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0809 8 8322208 8323095 Apr8g0809 8 8322208 8323095 ECH
Apr4g1194 4 10425071 10425865 Apr8g0809 8 8322208 8323095 PCT