Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0802 ATGGCGACGTTCGAACTGTACCGTAGGTTGACGATCGGAATGTGCTTGACGGAGACGTTGGATGAGATGGTGCAGCGCCTAGTCATGCTCAGGCGCAATGATGTCCCAAAAGGCTATCTTGCAGTTTATGTAGGAGTACACCAAAAGAAGCGGTTTGTGATTCCTATATCATATTTGAAACAACCTTCAATCCAAAACTTGCTGAGCGAGGTTGAACAAGAATTTGGTTTTGATCATCCAATGGGTGGCCTCACAATCCCTTGTAGAGAAGATTACTTCCTAAGCATCACTTCTCACTTGAAAAGGTCATAA 312 0.4423 MATFELYRRLTIGMCLTETLDEMVQRLVMLRRNDVPKGYLAVYVGVHQKKRFVIPISYLKQPSIQNLLSEVEQEFGFDHPMGGLTIPCREDYFLSITSHLKRS* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0802 103 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 3 26 - -
Apr8g0802 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 34 101 IPR003676 GO:0009733
Apr8g0802 103 Pfam Auxin responsive protein 31 98 IPR003676 GO:0009733
Apr8g0802 103 Gene3D - 1 29 IPR009083 GO:0005672|GO:0006367
Apr8g0802 103 PANTHER - 34 101 - -
Apr8g0802 103 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 4 26 IPR015872 GO:0005672|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0802 Apr-Chr8 8165491 8170559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0802 34 93 Calmodulin-binding Proteins AT3G43120 53.333 4.59e-15 64.7