Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0797 ATGGGTTTCCGTTTACCTGGTATGAGAAGGGTGTCTTCAAACGCAATGGATGCACCAAAAGGTTATCTTGCTGTCTACGTTGGAGCGAAAATGAAGCGGTTTGTGATCCCTATATCATACTTGAGCCAACCTTGGTTCCAAGACTTGTTGAGTCAAGCTGAGGAAGAATTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCTTACATATAACTTCTTGCTTCAATGGACACTGA 258 0.438 MGFRLPGMRRVSSNAMDAPKGYLAVYVGAKMKRFVIPISYLSQPWFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFLHITSCFNGH* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0797 85 PANTHER AUXIN-INDUCED PROTEIN 15A 8 83 - -
Apr8g0797 85 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 83 IPR003676 GO:0009733
Apr8g0797 85 Pfam Auxin responsive protein 12 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0797 Apr-Chr8 8138267 8142869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0797 17 85 Calmodulin-binding Proteins AT3G43120 52.174 1.81e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0797 K14488 - gmx:100820621 147.132