Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0795 ATGGGGAAGAAGAGAAGTAGGGTTTGCGAAGATGAGGAAATTGGATCTGATCTCAACCCTCCCAATCACGATGAAAACTCTCTCTATCAGGTTCTTGGCGTGGAGAAAACAGCATCTCAGCAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCTGATAAGAACCCCGGTGATGAGGAAGCTAAAGCGAGGTTTCAGCAATTGCAAAATGTCATCTCAATTCTTGGGGACGAAGAAAAACGGGCTGTTTATGATCAGACTGGTTGTGTTGATGATGCTGTCCTTGCAGGAGATGTTGTTCAGAATCTTAAAGAATTTTTCAGAACAATGTACAAGAAGGTCACAGAAGCTGACATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATTGATCTGTACAATAAGTGCAAGGGTAATATGAACAGGCTATTCTGTTCAATGCTTTGCTCAGATCCTAAACTCGACTCACACCGATTCAAGGATATTCTTGATGAGGCTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGGAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCCTTAAGAAGGAGGGCAAAATCATCGAGTAAGCAATCAGAAACAGATTTGTATGCTATCATGTCACAACGTCGAGATGAAAGGAAAGGCCGGTTTGATTCTATGTTCTCATCTCTAGTTTCAAAGTATGGTGGAGGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCAGCACAGAGAAAGCTGGAAAGCCGTAGGTCCTCGAAAAAGTCAAAGCGAAAATAA 840 0.419 MGKKRSRVCEDEEIGSDLNPPNHDENSLYQVLGVEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKARFQQLQNVISILGDEEKRAVYDQTGCVDDAVLAGDVVQNLKEFFRTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYNKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEAIAAGELKETKAYKKWGKKISETKPPTSPLRRRAKSSSKQSETDLYAIMSQRRDERKGRFDSMFSSLVSKYGGGQMPEPSEEEFEAAQRKLESRRSSKKSKRK* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0795 279 PRINTS DnaJ domain signature 29 47 IPR001623 -
Apr8g0795 279 PRINTS DnaJ domain signature 47 62 IPR001623 -
Apr8g0795 279 PRINTS DnaJ domain signature 64 84 IPR001623 -
Apr8g0795 279 PRINTS DnaJ domain signature 84 103 IPR001623 -
Apr8g0795 279 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 2 279 - -
Apr8g0795 279 Gene3D DnaJ domain 18 101 IPR036869 -
Apr8g0795 279 MobiDBLite consensus disorder prediction 194 215 - -
Apr8g0795 279 MobiDBLite consensus disorder prediction 194 279 - -
Apr8g0795 279 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 2 279 IPR042977 -
Apr8g0795 279 MobiDBLite consensus disorder prediction 1 24 - -
Apr8g0795 279 MobiDBLite consensus disorder prediction 1 19 - -
Apr8g0795 279 SMART dnaj_3 26 84 IPR001623 -
Apr8g0795 279 CDD DnaJ 29 81 IPR001623 -
Apr8g0795 279 SUPERFAMILY Chaperone J-domain 25 99 IPR036869 -
Apr8g0795 279 Pfam DnaJ domain 28 89 IPR001623 -
Apr8g0795 279 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0795 Apr-Chr8 8122186 8125138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0795 29 89 C2H2 Transcription Factor Family AT1G74250 42.424 4.34e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0795 K09529 - gmx:100781463 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0795 8 8122186 8125138 Apr8g0795 8 8122186 8125138 ECH
Apr4g1187 4 10342194 10344576 Apr8g0795 8 8122186 8125138 PCT