Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0793 ATGCTTGCAGGTGGTCATAAAATAATGGAGTCTCATGACGAAACGGGATGCCAGGCTCCTGAACGTCCCATACTTTGTATTAATAACTGTGGCTTCTTTGGAAGAGCTGCAACTATGAATATGTGTTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGAACAAGACAAACTTGCAGCAGCGTCGGTGGAAAACATCGTGAATGGCAATTCTAGCTGCAATGGGAAACAGGCTGTGACTGCTGGTTCTGTGGATGTACAAGTTGGAAATGTGGAGGCAAAAATAGGCTGTGCTGAGATTTCTGGGGATTCATCATCTTCTAGTGAGAATTTGGAGATGAAAGCTAAGACAGGTCCCAACAGATGTGCTACTTGCCAAAAGCGTGTTGGATTAACTGGTTTTGGCTGCAAATGTGGAAACCTATTTTGTGCAATGCACCGCTATTCTGACAAACATGATTGCCCCTTTGATTATCAGACTGTTGGTCGAGATGCTATAGCTAAAGCCAACCCTGTAATTAAGGCTGATAAGCTCGACAAAATCTAG 546 0.4359 MLAGGHKIMESHDETGCQAPERPILCINNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAAASVENIVNGNSSCNGKQAVTAGSVDVQVGNVEAKIGCAEISGDSSSSSENLEMKAKTGPNRCATCQKRVGLTGFGCKCGNLFCAMHRYSDKHDCPFDYQTVGRDAIAKANPVIKADKLDKI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0793 181 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 10 181 - -
Apr8g0793 181 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 25 61 - -
Apr8g0793 181 SMART A20_3 23 47 IPR002653 GO:0003677|GO:0008270
Apr8g0793 181 Pfam A20-like zinc finger 24 47 IPR002653 GO:0003677|GO:0008270
Apr8g0793 181 PANTHER AN1-TYPE ZINC FINGER PROTEIN 10 181 - -
Apr8g0793 181 Pfam AN1-like Zinc finger 122 159 IPR000058 GO:0008270
Apr8g0793 181 Gene3D - 97 177 IPR035896 -
Apr8g0793 181 SUPERFAMILY AN1-like Zinc finger 111 176 IPR035896 -
Apr8g0793 181 Gene3D - 9 72 - -
Apr8g0793 181 ProSiteProfiles Zinc finger AN1-type profile. 116 162 IPR000058 GO:0008270
Apr8g0793 181 ProSiteProfiles Zinc finger A20-type profile. 20 54 IPR002653 GO:0003677|GO:0008270
Apr8g0793 181 SMART AN1_Zf_4 122 159 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0793 Apr-Chr8 8102371 8104182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0793 13 181 C2H2 Transcription Factor Family AT3G52800 41.765 4.46e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0793 - - gmx:100499995 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0793 8 8102371 8104182 Apr8g0793 8 8102371 8104182 ECH
Apr8g0793 8 8102371 8104182 Apr2g2346 2 28286928 28289303 ECH