Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0784 ATGGCACAAGTGGACCTTAATCTCCACATTCCTCCTGGGATTCTGATTTTGCTATGTCTCATCACTTGCATTCCCCTCACAATGTCCCTCAACAACGATGGCCTCTCACTCCTTGCCCTCAAAGCAGCAATAGAAGTGGACCCCACAGGTGCCCTAACCTCATGGTCAGACTCAGCCACCACACCCTGCAACTGGGTCGGAGTGACCTGCAAACACGACCGAGTCACCCAATTAACCCTTCCATTCAAGAACCTAACCGGTTACATACCCTCCGAACTAGGACACCTCACCCAGTTAAAACGTCTCACTCTCCCTCACAACAATTTCTCTTCTTCCATCCCCTCTAGCCTCTTCAACGCAACCAGCCTCGTCGTTTTGGACCTCTCTCATAACTCTTTCACCGGTTCGCTACCTCAGTCGGTTTCGTCTCTCAAGAACCTCATGCATTTAGACTTATCCTCCAACTCCCTCTCCGGTTCCCTTCCGGTTTCCCTCTCCTCTCTCTCTTCACTCGTCGGAACCTTGAATCTCTCACATAACCAATTCTCCGGTCGGGTTCCGGCGTCTCTCGGAACACTTCCGGTCGTCGTGAATATAGATCTCCGGGACAATAATCTCACCGGAGAAATCCCTCAGGTTGGATCCTTGCTCAACCAGGGCCCTACCGCGTTCTCCGGTAATCCGTTTCTCTGTGGGTTTCCTCTGCAAAATGCGTGCCCCGAAGCTGTGAAAATTCCGCCGGAGATTTTACCAAGCACAGGAGACAATCCTCTGAACCCAAACCCGAAACCGGAAGCGCAGGAACGGAAAGCGCGGGGAGGGTCATTTTTCTCCGTTGCGATAATCTCGGGTGTGGTGTTGATGGCGGTGACGGGTTTTCTAACGGCGTGGGTTTTCCGACGACGGCGTTTGGTTGAGGAGGGGTTGGAGAAGGGAAAAGTGGAGAATGGGAATGAGAACGAGAATGGGTGTGGGGAGGAGGAGAAGGGGAGGTTCGTGGTGTTGGATGAAGAAGGGATTTTGGGGTTGGAGTTGGAGGATTTGTTGAGGGGTTCGGCGTATGTGGTGGGGAAGAGTAGGAGTGGGATCGTGTACAAGGTTGTCGGCGTCGGAAAAGGGGCTTTGGCGGCGGCGACGGTGGTGGCTGTTCGGCGATTAAGCGAGGGGGATGCCACGTGGCGGTTGAAGGAGTTTGAGTCGGAGGTTGAGGCTATTGGGAAGGTGCGACACCCCAATGTTGTGCCTTTGAGAGCGTATTACTATGCCAACGATGAGAAACTGCTCGTCACTGATTTCATCCGCAATGGCAACTTGCACGCCGCGTTGCATGGTGGGCCTGCCAATTCATTGTCACCGTTATCATGGGCAGCAAGGTTAACAATTGCTCAAGGAGCTGCAAGGGGCTTAATGTACATACACGAGTTCAACGGTAGGAAATATGTTCATGGCAACCTTAAATCAACAAAAATCCTTTTGGATGATGATCTTCATCCTTACATATCTGGTTTTGGACTTACCCGTCTCGGTTTGGGCGCCCCAAAGCCTACTCTATTGGCACCAAAACGGCAGAACTCAAACCACTCTATGGTAACCTCAGCAATTGGTTCAAAAGTTTCAGCTTCCTCTAACAACTACTTGGCTCCTGAGGTGCGCATAGGTGGTGGAAAGTTCACTCAGAAATGTGATGTGTATTCTTTTGGTATAGTGCTATTGGAACTTTTGACAGGTCGGCTTCCAGATTTAGGGGCAGAAAATGAAGGTAAGGATCTAGAGAGTTTTGTGAGAAAAGCATTCAGGGAGGAGCAACCCTTATCAGAGATTATAGACACTGCACTTTTGCCTGAGGTTTATGCTAAAAAGCAAGTTATTGCAGCATTTCATGTTGCGCTGAACTGCACAGAAGTTGATCCTGAATTGCGACCAAGAATGAGAACCGTGTCTGAGAGCCTTGATCGCATAAATATTCAGTGA 1971 0.5018 MAQVDLNLHIPPGILILLCLITCIPLTMSLNNDGLSLLALKAAIEVDPTGALTSWSDSATTPCNWVGVTCKHDRVTQLTLPFKNLTGYIPSELGHLTQLKRLTLPHNNFSSSIPSSLFNATSLVVLDLSHNSFTGSLPQSVSSLKNLMHLDLSSNSLSGSLPVSLSSLSSLVGTLNLSHNQFSGRVPASLGTLPVVVNIDLRDNNLTGEIPQVGSLLNQGPTAFSGNPFLCGFPLQNACPEAVKIPPEILPSTGDNPLNPNPKPEAQERKARGGSFFSVAIISGVVLMAVTGFLTAWVFRRRRLVEEGLEKGKVENGNENENGCGEEEKGRFVVLDEEGILGLELEDLLRGSAYVVGKSRSGIVYKVVGVGKGALAAATVVAVRRLSEGDATWRLKEFESEVEAIGKVRHPNVVPLRAYYYANDEKLLVTDFIRNGNLHAALHGGPANSLSPLSWAARLTIAQGAARGLMYIHEFNGRKYVHGNLKSTKILLDDDLHPYISGFGLTRLGLGAPKPTLLAPKRQNSNHSMVTSAIGSKVSASSNNYLAPEVRIGGGKFTQKCDVYSFGIVLLELLTGRLPDLGAENEGKDLESFVRKAFREEQPLSEIIDTALLPEVYAKKQVIAAFHVALNCTEVDPELRPRMRTVSESLDRINIQ* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0784 656 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 14 656 - -
Apr8g0784 656 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 656 - -
Apr8g0784 656 Gene3D Ribonuclease Inhibitor 30 172 IPR032675 -
Apr8g0784 656 ProSiteProfiles Protein kinase domain profile. 350 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0784 656 PRINTS Leucine-rich repeat signature 123 136 - -
Apr8g0784 656 PRINTS Leucine-rich repeat signature 144 157 - -
Apr8g0784 656 Gene3D Transferase(Phosphotransferase) domain 1 433 656 - -
Apr8g0784 656 SUPERFAMILY Protein kinase-like (PK-like) 355 652 IPR011009 -
Apr8g0784 656 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Apr8g0784 656 SUPERFAMILY L domain-like 33 236 - -
Apr8g0784 656 Gene3D Phosphorylase Kinase; domain 1 350 432 - -
Apr8g0784 656 MobiDBLite consensus disorder prediction 248 269 - -
Apr8g0784 656 Pfam Protein tyrosine and serine/threonine kinase 357 650 IPR001245 GO:0004672|GO:0006468
Apr8g0784 656 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Apr8g0784 656 Gene3D Ribonuclease Inhibitor 173 241 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0784 Apr-Chr8 7938618 7942033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0784 30 653 Receptor kinase-like Gene Family AT3G57830 57.746 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr8g0784 PK_Tyr_Ser-Thr 2.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0784 - - gmx:100806058 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0784 8 7938618 7942033 Apr8g0784 8 7938618 7942033 ECH