Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0781 ATGGTTAACTTTGTTGATTATTTATTCCTACTTCTCATTTGGCTAGCTTCAATCTTCTTGTTACGTGTAATAATTCTCACCAAATCTCGCACCAATGCACGCTTTCCACCAAGTCCTAGAGCCCTCCCTGTATTGGGACACCTCTACCTCCTCACCAAGCTCCCTCACCAAGCATTTCACAAGATCTCATCTCGTTATGGCCCTTTGGTCTACCTCTTGTTCGGTTCCAAACCTTGTGTTCTTGTTTCGTCACCTGAAATGGCAAGACAATGCCTCAAAACCCATGAAACGTGTTTCCTAAGCCGACCCAAAAGGACCAACCTGGACTACATCACATATGGCTCTTCAGATTTTGCGTCGGCATCCTATGGACCTTATTGGAGGTTCATCAAAAAGCTTTGCATGACTGAACTCCTAGGAAGCCGCATGGTTCACCAACACCTTCCTATTAGAGTAGAGGAAAGAAGGCTATTTTTGGAGGGTATGCTGGAAAAGGCAAATTTGAAAGAGGAGGTGAAAATAGGCAAGGAGCTAGCCATGCTTGCCAATAACATAATCACAAGGATGGCTTTGAGAAGAAGGTGTTGTGATGTTGAAGGGGAAGGGCACCAATTGATTGAGTTGGTGAAAGAAATGACTGAGTTAGCAGGGAAGTTTAACTTGGGTGACATGTTGTGGTTTGTTAAGAAGTTGGATTTGCAAGGGTTTGGTAAAAGGCTTGAGAGTGTCAGAAGTAGGTATGATGCTATAATGGAGAGGATCATGAAGGACCATGAAGATGCAAGAAGGAAGAAGAAGGAAATGGGCCGTGATGGAGATGAAGAAGTGAAGGATTTGCTTGATATTCTACTTGACATCTATGATGATGAAAATTCAGAGATTAGATTAACCAGAGAAAATATCAAGGCCTTTATTATGAACATATTTGGTGCTGGAACTGAGACATCATCCACTACAATAGAATGGGCTTTGGCTGAGCTAATCAACCATCCAGATAAGATGGCAAAAGCATGGCAGGAGATTGATTCAGTGGTTGGTAAGAATAGATTGGTAGAGGAATCAGATATTCCCAACCTTCCCTATGTTCAGTCTATAGTAAAGGAAACAATGAGGCTTCACCCCACTGGGCCCTTATTGGTGAGACAATCTACTGAAGATTGTAATGTTGATGGGTATCACATTCCAGCAAGGACCACTGTATTTGTAAATGTTTGGGCCCTTGGTAGGGACACAAACTACTGGGAAAATCCACTTGAGTTTAAGCCAGAGAGGTTCCTTAATGAAGAGGGACAGAGCCCATTGGATCTGAAAGGACAACATTTTGAACTATTGTCATTTGGTGCTGGAAGAAGAAGTTGCCCTGGTGCCTCACTAGCTTTGCAAATTATTCCTACAACTCTGGCAGCAATGATTCAGTGTTTTGAATGGAAAGTTGGAGAAGAAGGGAATGGAACTGTTGACATGGAAGAGGGACCTGGACTGGCCCTTCCAAGGGCACATCCCCTAATACGTGTCCCTGTGGCTAGGCTCCATCATTTTCCTCTTGTCTAA 1551 0.4326 MVNFVDYLFLLLIWLASIFLLRVIILTKSRTNARFPPSPRALPVLGHLYLLTKLPHQAFHKISSRYGPLVYLLFGSKPCVLVSSPEMARQCLKTHETCFLSRPKRTNLDYITYGSSDFASASYGPYWRFIKKLCMTELLGSRMVHQHLPIRVEERRLFLEGMLEKANLKEEVKIGKELAMLANNIITRMALRRRCCDVEGEGHQLIELVKEMTELAGKFNLGDMLWFVKKLDLQGFGKRLESVRSRYDAIMERIMKDHEDARRKKKEMGRDGDEEVKDLLDILLDIYDDENSEIRLTRENIKAFIMNIFGAGTETSSTTIEWALAELINHPDKMAKAWQEIDSVVGKNRLVEESDIPNLPYVQSIVKETMRLHPTGPLLVRQSTEDCNVDGYHIPARTTVFVNVWALGRDTNYWENPLEFKPERFLNEEGQSPLDLKGQHFELLSFGAGRRSCPGASLALQIIPTTLAAMIQCFEWKVGEEGNGTVDMEEGPGLALPRAHPLIRVPVARLHHFPLV* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0781 516 SUPERFAMILY Cytochrome P450 36 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 513 - -
Apr8g0781 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 513 - -
Apr8g0781 516 Gene3D Cytochrome P450 23 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 Coils Coil 251 271 - -
Apr8g0781 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Apr8g0781 516 Pfam Cytochrome P450 36 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0781 516 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0781 Apr-Chr8 7902992 7904663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0781 1 509 Cytochrome P450 AT5G06900 52.055 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0781 K24188 - gmx:100807524 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0781 8 7902992 7904663 Apr8g0781 8 7902992 7904663 ECH
Apr4g1176 4 10127716 10134023 Apr8g0781 8 7902992 7904663 PCT