Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0780 ATGGACAATATTCAAGAATACATTCCAATATTCCTAGTTTGTCTAGCCTCAATAATATTGCTCCAAGCCATATTCAGAAAAAATGGATCAAAATTTAACCTTCCACCTGGTCCATTTGCCTTACCAGTTATTGGACATTTCCACTTACTAAAATCACCCCTTCACAAAGCTTTTCAGAAAATTTCAAATCACTATGGACCCTTGATTCATATCTATCTCGGGTCCACTCCCATTGTTGTTGTTTCCTCTGCAGAAATTGCCCAAGAGATATTCAAAACCCATGAACTTTCCTTCTCTAACCGTCCTCCAAATGTTGCTATCAGTTATCTCACTTACAATTCATCTGATTTAGCATTTGCTCCTTATGGAACCTATTGGAAGTTCATGAAGAAACTTTGCATGTCAGAACTTCTTAATGGGAAGATGCTGGATCAACTCCTACCCATTAGGCAAGAGGAGATAAATAGGTTTCTGAAGATGATGCAAAAGAAAGCTGAAGCATGTGAGCCTGTGAATGTTGGCGATGAGCTTTTAAAGCTAACAAATAGCATAGTGATGAGAATGGCAATTAGCAAAAGCTGTTTTAACAGCGATGATGAAGCTCACAAGGTGACAGAAAGGATCAAAGAATCTGCCATGTTGAGTGGAAAGTTTAACCTTGCAGATTTTTTTTGGTTTTGTAAGAGATTTGATATGCAAGGAATAGGGAAGAGGCTACAGAAGGTTCGAGACAGGTTTGACACCATGATAGAGAGTATCATTCAGGAGCATGAAGAAGGAAGAAAGAAATTGACCAAAAAGGATGCGGCAAAGGATGTACTTGATGCTCTTTTGAGCATTTATGAAGATCAAAGCTCAGAGGTCAAAATAACAAGAGATAACATTAAAGCCTTCTTGGCGGATATGTTCTCTGGTGGGACAGATACAACTGCTGTTACTCTAGAATGGTCACTGGCAGAACTAATTAACCATCCAACAATCATGGAGAAAGCAAGGAAGGAAATTGACTCTGTGATTGGCAAGGACAAAATAGTAGTGGAATCAAATATAGCCAATTTTCCTTATCTCCAAGCCATAGGGAAGGAGACACTAAGGCTTCACCCACCGGCTCCGTTTATAATGAGAGAGTCTACTGAGAATTGCATCATTGCTGGATATAATATTCCAGCAAAGACACAAGTTTTCACTAATGTGTGGGTCATGGGAAGGGATCCAAAACACTGGGATAAGCCTCTTGAGTTCATGCCAGAAAGGTTTCTTAGCAAAGATGAGAATGGAATGAAATACCAAGTTGAAGTTAGGGGACAACATTATCAACTTTTGCCATTTGGGAGTGGAAGGAGAGGGTGTCCTGGAACATCACTAGCACTAAATATTGCTCACACCACCCTTGCTGCTATGATTCAATGCTTTGAATGGCAGGGTGAAGAAGATGGAGGGAATGGGGGTAGCGTTAACATGAATGAAGGACCTTCATTTATTCTTTCTAGAGCCCATCCTCTAATTTGTGTCCCAAAAGCAAGACTCGTGCCATTTCCTTCTATGCCATGCTAA 1554 0.4009 MDNIQEYIPIFLVCLASIILLQAIFRKNGSKFNLPPGPFALPVIGHFHLLKSPLHKAFQKISNHYGPLIHIYLGSTPIVVVSSAEIAQEIFKTHELSFSNRPPNVAISYLTYNSSDLAFAPYGTYWKFMKKLCMSELLNGKMLDQLLPIRQEEINRFLKMMQKKAEACEPVNVGDELLKLTNSIVMRMAISKSCFNSDDEAHKVTERIKESAMLSGKFNLADFFWFCKRFDMQGIGKRLQKVRDRFDTMIESIIQEHEEGRKKLTKKDAAKDVLDALLSIYEDQSSEVKITRDNIKAFLADMFSGGTDTTAVTLEWSLAELINHPTIMEKARKEIDSVIGKDKIVVESNIANFPYLQAIGKETLRLHPPAPFIMRESTENCIIAGYNIPAKTQVFTNVWVMGRDPKHWDKPLEFMPERFLSKDENGMKYQVEVRGQHYQLLPFGSGRRGCPGTSLALNIAHTTLAAMIQCFEWQGEEDGGNGGSVNMNEGPSFILSRAHPLICVPKARLVPFPSMPC* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0780 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Apr8g0780 517 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 Gene3D Cytochrome P450 24 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 SUPERFAMILY Cytochrome P450 35 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 Pfam Cytochrome P450 35 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0780 517 PANTHER CYTOCHROME P450 93A2 5 513 - -
Apr8g0780 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0780 Apr-Chr8 7891506 7893786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0780 1 508 Cytochrome P450 AT5G06900 46.863 1.46e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0780 K24188 - gmx:100811919 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0780 8 7891506 7893786 Apr8g0780 8 7891506 7893786 ECH