Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0777 ATGGCTTCCACTGTTAAGAGCACCAACCCAACAACAACCCAACTTGAACCACTCCCACCACCCCCACATCTTCATCCCCATCATCATCATCATCATCCAACTCAAGAACACCAAATTTCTTTTGGAATGATGCCATCTTCATCATCCTCTTCTATCCCCGGAAACTACTTAAGCAAAGATTCGGGAGCGTATGATTTGGGGGAATTGGATCAAGCCTTTTTTTTGTATCTCGATGGACAGGCTGACCCTTCCAGTGTTCAACAAGACCAAAGACAGAACTCTTCATCATTAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAGCCTATGCACGTAGTGCCTCCATCCAATTCCAAGGCTAGCATGGAATTACCTTCTCCACAAACCAGTGGCTCCAAAAGACCATCAACATCAGAACCGTCCATGAAGTTGGCCAACCCACCCAGTGATGCCGCCCCCTCTGCGCCTGAGCCACCCAAAGCTGTAAAACGAGAAAGCAATCGCAAGGGAACAACGTCAAGTTCTGAACAGGAAGGACCCAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCGAGGAAAAGCAGGCTCAGGAAAAAGGCGTACGTTCAGCAGCTAGAGTCAAGTAGGATTAAGCTTAATCAGCTAGAACAGGAGTTACAGCGTGCTAGAACTCAAGGCATATTAATGGGTGGAAGTGGACTAGTGGGAGGGGAGCAAGGCATTCCTATCGCTATGAGTAGCACTAGCTCAGAGGCTGCAATGTTTGACGTGGAATATTCAAGATGGTTAGAGGAGCACCACCGCCTAGTGTGTGAGCTAAGAGCTGCAGTGCAAGAACATCTTCATGAAAACGAGCTTCGTTTATATGTGGACAACTGTTTGGCTCACTATGATCAAGTAATGAACCTCAAGAGCTTAGTGGCCAAAACAGACGTATTCCATCTTGTTTTTGGTATGTGGAAGACCCCAGCTGAACGTTGCTTTATGTGGATCGGTGGGTTCAGGCCATCTGAACTCATCAAGATTATTCTGAGTCAAATTGAGCCTCTTACGGAGCAACAAATTCTTGGGATATGTGGGTTGCAACAATCTACACAAGAGGCTGAAGAGGCTCTTTCTCAAGGTCTTGAAGCTCTCAACCAATCTCTCTCAGACACTATAGCATCAGACTCTTTGTGCTGCACTCCCAACATGACTAACTACATGGGACAGATGGCTGTGGCAATGAACAAGCTCTCCACACTTGAAAGTTTTGTGAGACAGGCTGATAATCTGAGGCACCAGACAATTCACCGTCTGCATCATCTTCTAACAACACGCCAAGCTGCGAGGTGTTTGGTGGCAATTTCTGAGTACTTCCATCGTCTTCGAGCCCTGAGTTCTCTGTGGTTGACACGCCCTCGCCAAGAGTAA 1443 0.4705 MASTVKSTNPTTTQLEPLPPPPHLHPHHHHHHPTQEHQISFGMMPSSSSSSIPGNYLSKDSGAYDLGELDQAFFLYLDGQADPSSVQQDQRQNSSSLGMRPPPTLNIFPSQPMHVVPPSNSKASMELPSPQTSGSKRPSTSEPSMKLANPPSDAAPSAPEPPKAVKRESNRKGTTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARTQGILMGGSGLVGGEQGIPIAMSSTSSEAAMFDVEYSRWLEEHHRLVCELRAAVQEHLHENELRLYVDNCLAHYDQVMNLKSLVAKTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLSDTIASDSLCCTPNMTNYMGQMAVAMNKLSTLESFVRQADNLRHQTIHRLHHLLTTRQAARCLVAISEYFHRLRALSSLWLTRPRQE* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0777 480 MobiDBLite consensus disorder prediction 83 192 - -
Apr8g0777 480 MobiDBLite consensus disorder prediction 83 101 - -
Apr8g0777 480 MobiDBLite consensus disorder prediction 113 147 - -
Apr8g0777 480 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 231 IPR004827 GO:0003700|GO:0006355
Apr8g0777 480 SUPERFAMILY Leucine zipper domain 189 231 IPR046347 GO:0003700|GO:0006355
Apr8g0777 480 Pfam Seed dormancy control 280 354 IPR025422 GO:0006351|GO:0043565
Apr8g0777 480 PANTHER TRANSCRIPTION FACTOR TGA9 77 479 - -
Apr8g0777 480 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 77 479 - -
Apr8g0777 480 ProSiteProfiles DOG1 domain profile. 262 476 IPR025422 GO:0006351|GO:0043565
Apr8g0777 480 CDD bZIP_HBP1b-like 189 241 - -
Apr8g0777 480 MobiDBLite consensus disorder prediction 39 54 - -
Apr8g0777 480 SMART brlzneu 185 251 IPR004827 GO:0003700|GO:0006355
Apr8g0777 480 MobiDBLite consensus disorder prediction 1 54 - -
Apr8g0777 480 Gene3D - 188 238 - -
Apr8g0777 480 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Apr8g0777 480 Coils Coil 208 235 - -
Apr8g0777 480 Pfam bZIP transcription factor 189 227 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0777 Apr-Chr8 7854337 7861707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0777 54 480 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.494 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr8g0777 DOG1 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0777 K14431 - gmx:100800059 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0777 8 7854337 7861707 Apr8g0777 8 7854337 7861707 ECH
Apr4g1170 4 10063715 10069809 Apr8g0777 8 7854337 7861707 PCT