Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0772 ATGGCATCTAATTTTCGTTCAAGAAAAGATTTCAAGCCAACAGATGATGAACTGATCCGGTTGTTCCTTTACAATAAGGTCCATGGCAAACCTTTGCCTAGTGATGCTACCATTCTTGAATATGATTTGTACGGTGACAAAAACCCTTGGGAAATTTGGGAAGCTTTTGCTGGTTCCAACTCATACAGTGGAAAGGACCTGTATTTCTTCACCACACACAAGAAGAAGTTCCAGAATGGGTCACGTTTAGTTCGAACCATTGGAAAGGGTTCATGGGAAGGTGAAGATGTTGGGAAAGAAGTAGTGGCCAGTGATACTAACCAACGCATTGGGATAAAGAAACGTTTCCGATTCGAGAAGAGTGGCACTCACCACGATGGTGCATGGATCATGCATGAATACAGCCTTGATTCATCTTTGTCAAGTGATACATCAGCCAACAATTATGTTCTATGCAGATTTAGAAAGAATCTGAGACATAATGTTGGTGTAAAAAGAGGTAGAGGAAGAACTAAGACAGAAGAGATCAATGTCACCAATCAAAGGAGAACCGTCGTTCTTGCACTTCCGGCACCCCTACAATCAGACAACAAGAGTACTGTTTTGTTAAGGAAAGATAATTACCAAGAACCAAGAAACCAACCTCATAATGGAGATCAGCAGAACCAAACCCGTGAATCTACCACTAAAACCGAGTTTGAAGATAATAAGGATGAAGATGGTGATATAAATATGTCTTGGCCAGAGTTATTTTCACTGCAGTTAAGAAATTTTAAGGGATGCTTGATCCAAGAGGAAGAGATCCCTATGATTCCCAATACCTTTTACATGGATTTGATGTCTGAAAATATTCGTAGTAAATAA 864 0.3981 MASNFRSRKDFKPTDDELIRLFLYNKVHGKPLPSDATILEYDLYGDKNPWEIWEAFAGSNSYSGKDLYFFTTHKKKFQNGSRLVRTIGKGSWEGEDVGKEVVASDTNQRIGIKKRFRFEKSGTHHDGAWIMHEYSLDSSLSSDTSANNYVLCRFRKNLRHNVGVKRGRGRTKTEEINVTNQRRTVVLALPAPLQSDNKSTVLLRKDNYQEPRNQPHNGDQQNQTRESTTKTEFEDNKDEDGDINMSWPELFSLQLRNFKGCLIQEEEIPMIPNTFYMDLMSENIRSK* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0772 287 MobiDBLite consensus disorder prediction 208 243 - -
Apr8g0772 287 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Apr8g0772 287 SUPERFAMILY NAC domain 10 155 IPR036093 GO:0003677|GO:0006355
Apr8g0772 287 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 237 - -
Apr8g0772 287 ProSiteProfiles NAC domain profile. 5 157 IPR003441 GO:0003677|GO:0006355
Apr8g0772 287 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 11 237 - -
Apr8g0772 287 MobiDBLite consensus disorder prediction 228 243 - -
Apr8g0772 287 MobiDBLite consensus disorder prediction 213 227 - -
Apr8g0772 287 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0772 Apr-Chr8 7803848 7805868 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0772 11 154 NAC Transcription Factor Family AT5G13180 38.776 3.59e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr8g0772 NAM 1.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0772 - - aprc:113871407 585.874