Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0771 ATGAGTTCAGGCACGGTCACCAAACCACAATCCTCTTCCTCTTCCTCACCCAACTCCTCCTCAGAGTCTCTAGATGGCTTGAAGTTTGGTAAAAAAATCTACTTTGAGGATGCGAGTGTTGCAACTCAAGCCAAAACGAATGGTGGGTCATCTTCATCTTCTTCAAAGAAAGGAAGGGGTGGTTCAGTACAAGCCACTCAGCCTCCTAGGTGTCAGGTTGAGGGGTGTAAAGTAGATCTGAGTGGTGCTAAGGCTTACTATTCAAGGCATAAAGTCTGTGCCATGCACTCTAAATCCCCTACTGTTATTGTTGCCGGTCTTGAACAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCTGCTTTCTGAATTTGATCAAGGAAAAAGAAGCTGCCGTAGGCGACTTGCTGGCCATAATGAACGCCGCCGAAAGCCCCATCCCAGCTCCTTATTAACCTCTCACTTTGCCAGGCTTTCTTCGCCTATTTTTGATGACAATGGCAGAGGTGGTAGCTTTCTGATGGAATTTGCTTCATACCCAAAGCTGAGAAATACATTGCAAACTCCAAGATCATCTGAACTAATTCCTGGGAATCAAGCTGCAACACTTAGCTGGCAGGCCAACTCAGACACACAATCTGAATTTTTTCTGCAAGGTTCAGTGAGTGGTGGAACTAGCTTCCTTGGTCCTAGACATCCTTCAGTGGAAAATTATGCCAGGGTCACTGACTCAGGCTGTGCTCTCTCTCTTCTGTCAAGTCAAACATGGGGTTCTAGAAACACACCACCAAATGTTGAGCTGAGCAACTTGTTGAATTTCAATGGGACACCCATGACACAACTTGTTGCAGCATCTCCTCAAGTTGCAGCCATCCATCAACTTCCAAATGCAACGTCATGGTACATAAAAGGAGTTGATTCTGGTACTTGTTCGCCCGAGGTTGTCCCTGATCTTGGTCTGGGTCATATTTTGCCGCCTCTTCACAGCCACCTTCATGATGAGCTTGATCTATCACAGCAGGGCAGGAGGCATTACATGGATCTAGGGGAGTCCCGGGCCTATGAGTTTTCTCACTGGTCACTTTAA 1086 0.4641 MSSGTVTKPQSSSSSSPNSSSESLDGLKFGKKIYFEDASVATQAKTNGGSSSSSSKKGRGGSVQATQPPRCQVEGCKVDLSGAKAYYSRHKVCAMHSKSPTVIVAGLEQRFCQQCSRFHLLSEFDQGKRSCRRRLAGHNERRRKPHPSSLLTSHFARLSSPIFDDNGRGGSFLMEFASYPKLRNTLQTPRSSELIPGNQAATLSWQANSDTQSEFFLQGSVSGGTSFLGPRHPSVENYARVTDSGCALSLLSSQTWGSRNTPPNVELSNLLNFNGTPMTQLVAASPQVAAIHQLPNATSWYIKGVDSGTCSPEVVPDLGLGHILPPLHSHLHDELDLSQQGRRHYMDLGESRAYEFSHWSL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0771 361 MobiDBLite consensus disorder prediction 1 24 - -
Apr8g0771 361 SUPERFAMILY SBT domain 69 150 IPR036893 GO:0003677|GO:0005634
Apr8g0771 361 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 361 IPR044817 GO:0003677
Apr8g0771 361 MobiDBLite consensus disorder prediction 43 68 - -
Apr8g0771 361 Pfam SBP domain 71 144 IPR004333 GO:0003677
Apr8g0771 361 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
Apr8g0771 361 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 1 361 - -
Apr8g0771 361 Gene3D - 61 132 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0771 Apr-Chr8 7775393 7779614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0771 27 361 SBP-box Gene Family AT2G42200 42.382 8.03e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Apr8g0771 SBP 4.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0771 - - gmx:100789301 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0771 8 7775393 7779614 Apr8g0771 8 7775393 7779614 ECH
Apr4g1160 4 9918860 9923359 Apr8g0771 8 7775393 7779614 PCT