Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0770 ATGTATCTTTCTTCGCAGGTGTCGAACGGTGCATGTAGCAGTCTAGCCAAGGGTGGAGGCTCAGAAAATGACGACTTCAACTTCCAACAACATGAGCAGCACGTAGTTGATGATTCCTTTTTGTGTTTCAATTTTCCAGAAGCTTCTGCTTCGCAAAATCTGCAGTGTCAGTGTTCTGGAGACAACTCTTCAACCCCGCTATTCAGAAGCTTTGTTGATTCTCTCTTGTCCAGCCACGAAGACACCTTTTGTCAAACATATAGTGAACATACTTCCCTTGACCTGTCACTTTATGAGAATTTGGGACATGTTCATAACAGGCTCATGGGTGATGATTCTGCCCCTGTTACTCAGCGTGGAAACTGTACTTCTGGCAAAGTTCCAACACGACAAAAAAGAATAAAATGGACCAAAGATTTGCATGAGCAATTTGTTGCAGCTGTCAATATCCTTGGTGGTCCTCAAGAAGCAAAGCCTAAGGCAGTGCTACAGCTGATGAATTCAACGTCACTGACCATTTTTCATGTTAAGAGTCACTTGCAGGTTACACTCTTTAACATAATCACAAGCTATAAGCAAATTGATGAATCAAGGCAACTGCAACTTGAGGTTCGGAGGAGTATTGAAGAACAATTAGAAATTCAACGAAATTTGCTGATGCAAGTTGAACAACAAAAGAAACAGCTCCAGAATGTTTGA 699 0.4163 MYLSSQVSNGACSSLAKGGGSENDDFNFQQHEQHVVDDSFLCFNFPEASASQNLQCQCSGDNSSTPLFRSFVDSLLSSHEDTFCQTYSEHTSLDLSLYENLGHVHNRLMGDDSAPVTQRGNCTSGKVPTRQKRIKWTKDLHEQFVAAVNILGGPQEAKPKAVLQLMNSTSLTIFHVKSHLQVTLFNIITSYKQIDESRQLQLEVRRSIEEQLEIQRNLLMQVEQQKKQLQNV* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0770 232 Gene3D - 131 185 - -
Apr8g0770 232 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 191 230 IPR044848 GO:0003700
Apr8g0770 232 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 118 181 IPR044848 GO:0003700
Apr8g0770 232 Coils Coil 205 232 - -
Apr8g0770 232 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 191 230 - -
Apr8g0770 232 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 118 181 - -
Apr8g0770 232 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 132 183 IPR006447 GO:0003677
Apr8g0770 232 SUPERFAMILY Homeodomain-like 129 182 IPR009057 -
Apr8g0770 232 Pfam Myb-like DNA-binding domain 135 182 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0770 Apr-Chr8 7768388 7771426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0770 129 230 G2-like Transcription Factor Family AT4G28610 43.307 4.68e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr8g0770 Myb_DNA-binding 8.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0770 - - aprc:113871405 467.233