Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0769 ATGAGCAAGAAGAAAGTTGATTGTCTAGAAGGGATTCAACAAAGCTATGGTCTAAATAGTGATTTCAATTATTTTGATATGAGACAGGCTTCAAATATTGGTACTTGCAATCAGCCACTTGCCATGGCATGTGGTGGAGGAATGGAACAGCAACCATATTTAGGCCAAGCCAAATCATCTAGCAGCATCATTAGCCGTTTTGAGTCACCAGCTTCAGCCTTCTATGCTACAGAATTCTTCATGGGCTTCCCACAATATGATAGCCAAGTTGGTAATCCCTCTTTGATATCTCAGTTCTCTAAGGTTAATGATATGGAGTTCCCTTTGTATCAATCTCCTAGGGAAAGCCTTTTCTTGGATTCGCCAGCAAACCAACCTGGCCACAACTTTGAGTGGTCAAATCCCTCGCAAACAATGCTGAAATCTCAATTGAACAGTGATCAATGTTGTATATCTACAGAGAAATCTAATAAAATCCCATGTGGGAATTTTTCTGGCAGAAGTTTTCTTCCAATAGAACAGCCAAAGTTGTTCATTGATGATGCTGCCTCAGTTAGTAGGAGCCCATCAACTCCTTCTAAAGGAAATCAGGATCAAACAGTTTCATGTGGCTCATATAATTTACCAGTTACACAGCTTAGCTTTTCTTCTCAGCAGGAGAAGCTGTCTCCAACACTCTCAGCAGGTAGTGCTTCTGTTGCTTGTGGGAACCCTGTTTCCAATGGACCTGTAGTCTCGAGCAAAACGCGAATAAGATGGACTCAGGATCTTCATGAAAAGTTTGTAGAGTGTGTGAATCGCCTAGGAGGTGCTGAGAAGGCAACACCAAAAGCTATATTGAGGCTGATGGAATCAGATGGAGTGACCATATTCCATGTTAAAAGCCATTTGCAGAAATATAGAATTGCCAAATATATGCCTGAGTCAACTCATGGGAAATCTGAGAAAAGAACCCATGTAGAGAATGTGCATCTTGATGCCAAAACCGGCTTGCAAATTAGAGAGGCACTTCAGCTGCAGCTAGATGTTCAGAGGCGTCTTCATGAACAGCTAGAGATTCAGAGAAAATTACAGTTACGGATTGAGGAACAAGGTAAGCAGTTGAAGATGATGTTTGACCAACAGCAGAAGACAAGTAATAGTCCCTTGAATACTCAGAATTTGGGCACTACAACTAATATTGATATACCAATGAGACCTAAAGATGTTCAGGTTTCCATTTCTGAAGGGTCTGAAACTCCTTATTCACTTCCAAGATAA 1260 0.4103 MSKKKVDCLEGIQQSYGLNSDFNYFDMRQASNIGTCNQPLAMACGGGMEQQPYLGQAKSSSSIISRFESPASAFYATEFFMGFPQYDSQVGNPSLISQFSKVNDMEFPLYQSPRESLFLDSPANQPGHNFEWSNPSQTMLKSQLNSDQCCISTEKSNKIPCGNFSGRSFLPIEQPKLFIDDAASVSRSPSTPSKGNQDQTVSCGSYNLPVTQLSFSSQQEKLSPTLSAGSASVACGNPVSNGPVVSSKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILRLMESDGVTIFHVKSHLQKYRIAKYMPESTHGKSEKRTHVENVHLDAKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSNSPLNTQNLGTTTNIDIPMRPKDVQVSISEGSETPYSLPR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0769 419 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 42 412 IPR044848 GO:0003700
Apr8g0769 419 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 42 412 - -
Apr8g0769 419 MobiDBLite consensus disorder prediction 375 394 - -
Apr8g0769 419 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 248 303 IPR006447 GO:0003677
Apr8g0769 419 SUPERFAMILY Homeodomain-like 246 302 IPR009057 -
Apr8g0769 419 Pfam MYB-CC type transfactor, LHEQLE motif 331 378 IPR025756 -
Apr8g0769 419 Coils Coil 334 354 - -
Apr8g0769 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 305 IPR017930 -
Apr8g0769 419 MobiDBLite consensus disorder prediction 375 419 - -
Apr8g0769 419 Gene3D - 247 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0769 Apr-Chr8 7760988 7764008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0769 240 375 G2-like Transcription Factor Family AT4G28610 58.993 1.86e-48 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr8g0769 Myb_CC_LHEQLE 1.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0769 - - gmx:100780919 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0769 8 7760988 7764008 Apr8g0769 8 7760988 7764008 ECH