Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0754 ATGTTTTCGTGGCTGGCAAGGATAGTGTCGGCGTGCTTGAGACCGGTGAGGCGCTATGCACGTATGAACAAGGATGATTTCGATGATGCATCCACAATTGGAGATGCTCTCATATGGTGTAAGGACCTTGAGAAGCACTCGTGTGGGGAATTTTCCTTCGCCGTGGTTCAGGCCAATGAAGTTATTGAGGATCATAGCCAGGTTGAGACCGGTTCTGATGCTGTATTCGTTGGTGTTTATGATGGACATGGTGGTCCTGAAGCTTCTCGCTTCATCAATGATAACCTCTTCCATAATCTCATGAGGGTTGCTCAAGAAAATGGTTCTATCTCTGAAGATATTATCAGAAATGCTGTTTCTGCTACTGAAGATGGGTTTCTGACTCTTGTTCGAAGAAGTTATGGAATAAAGCCATTGATAGCAGCAATGGGTTCTTGTTGTCTGGTTGGTGTTGTTTGGAGAGGGACATTGTATATTGCGAATCTTGGAGACTCTCGTGCTGTAATTGGTTCTATAGGTAGATCTAACAAGATCGTTGCGGAACAGTTGACTAAAGAGCACAACGCTAGCAAAGAGGAGGTTAGACGAGAACTCAGATCTTTGCATCCAGAAGATTCGCAAATTGTAGTTATGAAACAAGGAACGTGGCGCATTAAAGGAATCATCCAGGTATCCAGATCTATAGGAGATGCATATTTGAAGCGGCCAGAGTTTTCTTTTGATCCTTCATTCCCACGGTTCCACCTTCCTGAACCTATCCGCCGGCCCGTGCTGACAGCCGAACCATCTGTATGTTCAAGAGTTTTACAACCTAATGATAAGTTCATTATCTTTGCATCTGATGGGCTTTGGGAACACATGACAAATCAGGAAGCTGCTGAGATTGTTTATAACAATCCACGATCGGGTATTGCAAGACGGCTTCTTAAGGCAGCTTTAAGCGAGGCAGCAAGGAAAAGGGAAATGAGATATAAAGACCTTCAGAAGATTGGAAAGGGGATCAGGCGTTTTTTCCATGATGATATCACTGTGATTGTTGTCTTCATTGACCATGAGCTGCACAGTAAGAAGGTTACGGTTCCTGAATTGTCCATCAAAGGGTTTATTGACACAGTTGGATCATCAAATTTTAGAAATTTCCGCGCATTGGATTGA 1155 0.4355 MFSWLARIVSACLRPVRRYARMNKDDFDDASTIGDALIWCKDLEKHSCGEFSFAVVQANEVIEDHSQVETGSDAVFVGVYDGHGGPEASRFINDNLFHNLMRVAQENGSISEDIIRNAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVVWRGTLYIANLGDSRAVIGSIGRSNKIVAEQLTKEHNASKEEVRRELRSLHPEDSQIVVMKQGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPEPIRRPVLTAEPSVCSRVLQPNDKFIIFASDGLWEHMTNQEAAEIVYNNPRSGIARRLLKAALSEAARKREMRYKDLQKIGKGIRRFFHDDITVIVVFIDHELHSKKVTVPELSIKGFIDTVGSSNFRNFRALD* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0754 384 PANTHER ALPHABET, ISOFORM E-RELATED 6 369 - -
Apr8g0754 384 Pfam Protein phosphatase 2C 64 317 IPR001932 -
Apr8g0754 384 Coils Coil 180 200 - -
Apr8g0754 384 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 369 - -
Apr8g0754 384 SUPERFAMILY PP2C-like 56 350 IPR036457 -
Apr8g0754 384 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Apr8g0754 384 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Apr8g0754 384 SMART PP2C_4 44 347 IPR001932 -
Apr8g0754 384 Gene3D - 36 359 IPR036457 -
Apr8g0754 384 CDD PP2Cc 51 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0754 Apr-Chr8 7482154 7485806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0754 1 380 PP2C-type Phosphatase Gene Family AT5G06750 70.332 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0754 K01102 - gmx:100778238 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0754 8 7482154 7485806 Apr8g0754 8 7482154 7485806 ECH
Apr8g0754 8 7482154 7485806 Apr3g2170 3 37569560 37579201 ECH
Apr4g1144 4 9763156 9765940 Apr8g0754 8 7482154 7485806 PCT