Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0745 ATGTTGTGCTGCGGAGGTGCAGAAGAGGATATTAGTGGTCCACCTGCAAACCAATACAGTGCATCACCTCAAGGGGGTAATACATACGGCGGAGACAGAGGAGAGCCAAGGGGCAATGGTGTGAAGAGTGGTGCTCCACAAAAAATATTACCAATTGAAATACCAGCAATTTCATTGGATGAATTAAATCGGTTAACAGACAACTTTGGTACAAATGCCTTAATTGGAGAAGGTTCCTATGGAAGGGTTTTCCGTGCTAAGTTGAGCGATGGCATGGATGCTGCAATTAAGAAGCTTGATACTAGTTCTTCACCAGAACCTGACTCTGATTTTGCAGCACAGTTATCAGTTGTTTCAAGACTGAAGCATGATAATTTTGTGGAGTTGATGGGATATTGTCTGGAGGCAAATAACAGAATTTTGGTTTATCAATATGCAAGTCTGGGTTCTTTGCATGACATATTACATGGAAGGAAAGGAGTGCAAGGGGCTGAACCTGGTCCAGTTTTAAACTGGAACCAGAGAGTAAAAATTGCATTTGGTGCAGCAAAAGGGCTTGAATATCTTCATGAGAAGGTTCAGCCTTCTATAGTTCATCGCGATGTTAGATCCAGCAATGTCTTACTCTTCAATGACTATGATGCCAAGATTGCAGATTTCAACTTGACAAATCAGTCTTCTGACACTGCAGCTAGGCTACATTCAACAAGAGTCTTGGGAACATTTGGTTACCATGCTCCAGAGTATGCCATGACTGGTCAGATAACCCAGAAAAGCGATGTTTATAGTTTTGGAGTTGTGCTTTTGGAACTCCTGACAGGAAGAAAGCCAGTGGACCATACAATGCCTAAAGGGCAACAAAGTCTTGTGACATGGGCAACTCCAAGACTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGAGTACCCGCCAAAGGCAATTGCTAAGTTAGCAGCGGTTGCAGCACTTTGTGTTCAGTATGAAGCTGACTTCAGGCCCAACATGACGATTGTTGTCAAAGCTCTACAGCCACTTCTCAATTCAAAACCAGCTGGCCCTGACTCTAATGCTTGA 1089 0.4316 MLCCGGAEEDISGPPANQYSASPQGGNTYGGDRGEPRGNGVKSGAPQKILPIEIPAISLDELNRLTDNFGTNALIGEGSYGRVFRAKLSDGMDAAIKKLDTSSSPEPDSDFAAQLSVVSRLKHDNFVELMGYCLEANNRILVYQYASLGSLHDILHGRKGVQGAEPGPVLNWNQRVKIAFGAAKGLEYLHEKVQPSIVHRDVRSSNVLLFNDYDAKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPDSNA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0745 362 PIRSF ILK 37 356 - -
Apr8g0745 362 ProSiteProfiles Protein kinase domain profile. 69 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0745 362 SMART tyrkin_6 69 347 IPR020635 GO:0004713|GO:0006468
Apr8g0745 362 MobiDBLite consensus disorder prediction 1 45 - -
Apr8g0745 362 PANTHER OS03G0226300 PROTEIN 1 361 - -
Apr8g0745 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 361 - -
Apr8g0745 362 SUPERFAMILY Protein kinase-like (PK-like) 46 347 IPR011009 -
Apr8g0745 362 Pfam Protein tyrosine and serine/threonine kinase 73 347 IPR001245 GO:0004672|GO:0006468
Apr8g0745 362 Gene3D Transferase(Phosphotransferase) domain 1 147 357 - -
Apr8g0745 362 ProSitePatterns Tyrosine protein kinases specific active-site signature. 197 209 IPR008266 GO:0004672|GO:0006468
Apr8g0745 362 Gene3D Phosphorylase Kinase; domain 1 43 145 - -
Apr8g0745 362 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0745 Apr-Chr8 7308288 7311553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0745 57 348 Receptor kinase-like Gene Family AT4G02010 47.458 1.95e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Apr8g0745 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0745 - - gmx:100786291 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0745 8 7308288 7311553 Apr8g0745 8 7308288 7311553 ECH
Apr4g1127 4 9609019 9611207 Apr8g0745 8 7308288 7311553 PCT