Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0742 ATGGACAAGTCAACAACAGAGAGAGAAACCCACGACTTCATGAACGTTGACTCCTTCTCTCAGCTCCCCTTCATCCGCCCCGCACCCCCCAATCCCATCAAAGAGAGAAACGGCATTCGCCTCTTTGGCATCGAATTCGCCAGCGGAAACGACGCCGTCCAACCCCAAGACGACACCCAATCCAATGAAACGACAACCAACAACATCAACGCATTCGACCTCGACTCCACCACAAACGACACCACCAACACCAACACAAACACAAACACCAACAACCCCACCAACACCAACAGCGAGAGTAGCCGCAGATTTGAATGCCACTACTGTTGCCGAAACTTCCCCACTTCCCAAGCCTTAGGGGGTCACCAAAACGCGCACAAACGCGAACGCCAACATGCGAAACGCGCGCATCTTCAGTCAACCATGGTGCACGGAAGCACTTTCTCCGACGGGCATCACCACGTGTATAACCTCATGAACTATCGCTTCAGTTCAACTCCAACAACACCAATGCCTTATCCAACGTGGAATACAAACGCCCCAAACACCACAAACGTCAACACAAACAGGTTCTACGGAACAACAACCTCTTTTTCTCATCAACAACAACAACCTATTAATGGAAGCCCCTTGGCCTTTTGGCGAGTTCCGAGTGGCACTAGTAACCCTAGTTTCAACCATGAACGGTCGTTGCCGACGTTGTTTGGTGGCGAGGAAATTAATAATGTCAGGTCCTCGCAGGTTGTTGGAGCCTCTGGTTCGCATTCCAAACGCGGTAGTGTCCACGACCATGAAAAGGAAACCGAATACCTATTTGGTCTCATTTGTCCAGATACTCTTCGTCAGGATTAA 852 0.5023 MDKSTTERETHDFMNVDSFSQLPFIRPAPPNPIKERNGIRLFGIEFASGNDAVQPQDDTQSNETTTNNINAFDLDSTTNDTTNTNTNTNTNNPTNTNSESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDGHHHVYNLMNYRFSSTPTTPMPYPTWNTNAPNTTNVNTNRFYGTTTSFSHQQQQPINGSPLAFWRVPSGTSNPSFNHERSLPTLFGGEEINNVRSSQVVGASGSHSKRGSVHDHEKETEYLFGLICPDTLRQD* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0742 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Apr8g0742 283 PANTHER ZINC FINGER PROTEIN GIS 1 267 - -
Apr8g0742 283 PANTHER ZINC FINGER PROTEIN GIS 1 267 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Apr8g0742 283 MobiDBLite consensus disorder prediction 52 100 - -
Apr8g0742 283 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Apr8g0742 283 SUPERFAMILY beta-beta-alpha zinc fingers 101 132 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0742 Apr-Chr8 7186407 7193554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0742 1 221 C2H2 Transcription Factor Family AT2G41940 40.161 2.77e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0742 - - vun:114190818 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0742 8 7186407 7193554 Apr8g0742 8 7186407 7193554 ECH
Apr4g1122 4 9498659 9499480 Apr8g0742 8 7186407 7193554 PCT