Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0736 ATGGGCGTCAATTCCTTCCCATCGGAGGATTCCGTCCTCGATCTCGACGAGCAGATCTCACAGCTCATGCAATGCAAGCCGCTTTCCGAGCAACAGTGTCCAGATACTAATTACTTGTTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACACTACTTGTGTCACTGAAAGTGCGTTACCCTCAGCGAATTACGATTCTTAGAGGAAACCATGAAAGTCGTCAGATCACTCAAGTATATGGATTTTATGATGAATGCCTAAGAAAGTATGGTAATGCTAATGTTTGGAAGATCTTTACAGACCTTTTTGATTTCTTTCCATTGACCGCATTGGTTGAGTCTGAAATATTTTGTTTGCATGGTGGACTTTCACCTTCAATCGAGACTCTTGATAACATAAGGAACTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTGTGGTCTGACCCAGATGATAGGTGTGGCTGGGGAATTTCTCCTCGTGGTGCTGGATATACTTTTGGCCAGGATATATCCGAACAGTTTAATCACACAAACCAGCTCAAATTGATTGCTAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCATGAACAAAAGGTTGTGACTATTTTTAGTGCACCTAACTACTGTTATCGATGTGGGAACATGGCTTCAATTTTGGAGGTTGACGATTCCAAGGGCCACACATTTATCCAGTTTGACCCTGCTCCTAGGAGAGGAGAACCTGATGTCACCCGTAGAACACCTGATTACTTCCTATGA 804 0.4316 MGVNSFPSEDSVLDLDEQISQLMQCKPLSEQQCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNQLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDSKGHTFIQFDPAPRRGEPDVTRRTPDYFL* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0736 267 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 8 32 - -
Apr8g0736 267 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 32 267 - -
Apr8g0736 267 SUPERFAMILY Metallo-dependent phosphatases 33 252 IPR029052 -
Apr8g0736 267 MobiDBLite consensus disorder prediction 248 267 - -
Apr8g0736 267 CDD MPP_PP2A_PP4_PP6 14 251 - -
Apr8g0736 267 ProSitePatterns Serine/threonine specific protein phosphatases signature. 72 77 IPR006186 GO:0016787
Apr8g0736 267 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 32 267 - -
Apr8g0736 267 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 8 32 - -
Apr8g0736 267 Gene3D - 11 267 IPR029052 -
Apr8g0736 267 Pfam Calcineurin-like phosphoesterase 32 200 IPR004843 GO:0016787
Apr8g0736 267 PRINTS Serine/threonine phosphatase family signature 38 65 IPR006186 GO:0016787
Apr8g0736 267 PRINTS Serine/threonine phosphatase family signature 71 95 IPR006186 GO:0016787
Apr8g0736 267 PRINTS Serine/threonine phosphatase family signature 106 132 IPR006186 GO:0016787
Apr8g0736 267 PRINTS Serine/threonine phosphatase family signature 135 162 IPR006186 GO:0016787
Apr8g0736 267 PRINTS Serine/threonine phosphatase family signature 191 211 IPR006186 GO:0016787
Apr8g0736 267 PRINTS Serine/threonine phosphatase family signature 213 229 IPR006186 GO:0016787
Apr8g0736 267 SMART pp2a_7 1 251 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0736 Apr-Chr8 7088889 7095757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0736 12 197 Calmodulin-binding Proteins AT5G63870 32.883 5.11e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0736 K04382 - gmx:100817449 523.472